Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00578 ATGGACCCTGCCAAAGCTGTTGAGATGGTGAACGAGAACACTATTTGTGTGGCTACTATATTGGGTTCCACTTATAATGGAGAGTTCGAAGATGTCAAGCTCTTAAACGACCTTCTGCTGGAAAAAAACAAGAAAACTGGATGGGATATACAGATTCATGTTGATGCTGCAAGTGGTGGCTTTATAGCCCCTTTCATTTACCCAGAGCTTGAATGGGATTTCAGACTCCCACTAGTGCGGAGCATCAATGTTAGCGGTCACAAGTATGGTCTTGTCTATGCGGGAATTGGTTGGGTTATTTGGAGGAGCAAGGATGACTTGCCTGATGACCTTATCTTCCATGTTGATTACCTTGGTGCTGACCAGCCAACTTTTACCCTCAATTTCTCCAAAGGTTCTAGTCAAATTATTGCTCAGTATTATCAGTTAATTCGCCTAGGCCGAGAGGGGTACCAAAGTTTGATGCAAAATTGCAGAGAAAATGCAATGTGGTTAAAGGAAGGATTGAAGAAGACTGGATGCTTTAACATAATTTCAAAGGACAATGGAGTTCCTGTTGTTGCATTTTCTCTTAAGGACAAAAGCATGCACAATGAGTTTGAGATATCAAACATGTTGCGTGGCTATGGTTGGAGTGTTCCAGCTTATCCAATGCCACCCGGTGCTGACCACATCAATGTACTCCGAGTTGTGATTAGAGCTGAGTTTTCTCGTGCACTTGCTGAACACTTTCTTCGTGACATCACAAGTGTGCTGCATGAGCTTCACAAACATCCCCCAAAGTTCAATGCCCAAACGAGGAATGTGCAGGAAGAGAGGGCTATCGATTGCAATGGTGATGTAGAGGGCATGTAG 855 0.4363 MDPAKAVEMVNENTICVATILGSTYNGEFEDVKLLNDLLLEKNKKTGWDIQIHVDAASGGFIAPFIYPELEWDFRLPLVRSINVSGHKYGLVYAGIGWVIWRSKDDLPDDLIFHVDYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGREGYQSLMQNCRENAMWLKEGLKKTGCFNIISKDNGVPVVAFSLKDKSMHNEFEISNMLRGYGWSVPAYPMPPGADHINVLRVVIRAEFSRALAEHFLRDITSVLHELHKHPPKFNAQTRNVQEERAIDCNGDVEGM* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00578 284 Gene3D - 1 171 IPR015421 GO:0003824
Rops11g00578 284 PANTHER GLUTAMATE DECARBOXYLASE 1 270 IPR010107 GO:0004351|GO:0006536|GO:0030170
Rops11g00578 284 SUPERFAMILY PLP-dependent transferases 1 258 IPR015424 -
Rops11g00578 284 FunFam Glutamate decarboxylase 172 259 - -
Rops11g00578 284 Pfam Pyridoxal-dependent decarboxylase conserved domain 1 192 IPR002129 GO:0016830|GO:0019752|GO:0030170
Rops11g00578 284 Gene3D - 172 259 - -
Rops11g00578 284 NCBIfam glutamate decarboxylase 1 255 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00578 Rops-Chr11 7945146 7946758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00578 1 265 Calmodulin-binding Proteins AT2G02000 75.472 3.18e-152 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00578 K01580 - gmx:100812201 449.899