Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00577 ATGATGTTGCAAGCAGAAGCTTCAGACTCTGAACTCTTCTTTCTCACTAACTTGGCTTCTCGCTATGGCATAAGTTCACTTCCAAGATTCAACATTCCAGAGAACTCAATGCCAAAGGAGGCAGTATACCAGAACATACACGACGAACTGCTGCTTGATGCTAATCCAAAGCTGAACTTGGCTTCCTTTGTCACCACAGCGATGGAGGAAGAGTGCAACAAGCTCATCATGGAATCTATCAACAAGAACTACATCAATATGGATGAATACCCTGTTACCACTGAGCTCCACAACCGGTGTGTGAACATGATAGCACGCTTATTCAATGCTCCAATTAGAGAAACTGAAAGTGCAGTTGGAGTGGGAACTGTTGGTTCATCAGAGGCTATAATGCTAGCAGGGCTTGCTTTCAAGAGAGGTGGCAGAACAAAAGCAAGGCTGAGGGCAAACCCTGTGACAAGCCCAACATTGTCACTGGCTCTAACGTGCACGTATGTTGGAAGAAATTTGCAAGGTATTTTGAGGTGGAATTGA 534 0.4476 MMLQAEASDSELFFLTNLASRYGISSLPRFNIPENSMPKEAVYQNIHDELLLDANPKLNLASFVTTAMEEECNKLIMESINKNYINMDEYPVTTELHNRCVNMIARLFNAPIRETESAVGVGTVGSSEAIMLAGLAFKRGGRTKARLRANPVTSPTLSLALTCTYVGRNLQGILRWN* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00577 177 Gene3D - 66 165 IPR015421 GO:0003824
Rops11g00577 177 PANTHER GLUTAMATE DECARBOXYLASE 1 157 IPR010107 GO:0004351|GO:0006536|GO:0030170
Rops11g00577 177 FunFam Glutamate decarboxylase 3 65 - -
Rops11g00577 177 Gene3D - 1 65 - -
Rops11g00577 177 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 152 IPR002129 GO:0016830|GO:0019752|GO:0030170
Rops11g00577 177 SUPERFAMILY PLP-dependent transferases 26 140 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00577 Rops-Chr11 7942599 7945360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00577 1 157 Calmodulin-binding Proteins AT5G17330 66.879 1.54e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00577 K01580 - gmx:100812201 223.402