Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00575 ATGGTAGGAACCTTCGACGTTGGAGCCGTTCCTTTCAACCCTGACGGGTGGGGTCCACTGGATCCCACCAGCGGCGGTGGAGCCAGCAACGGTAACCTCCCTCTCAACGTCCCCTTCGCTCCGTTCTCTCGCTCCGACAAGCTTGGCCGGATCGCAGATTGGACCCGCAATTTCAACAACCCGGGACGCCCTAAGAACCCTGCTGACTCCGCCTTCGATTTCACCAACGACGATTCCTTCCCTGCCTCCGCCGATGACGACTCCTCCTTCCGCCTCGTCGACGGGAAACCACCACCGCGACCCAAATTCGGGCCCAAATGGCGATTCCAGCAACAGCGCCAGCTTCCGCAGCGTCGTGACGAAGAGGTTGAAGCACGTAAGCGTGAGCAAGAGAAGGAAAGGGCTCGCCGTGACCGTCAATACCATCAAAACCGTTCAAACCCTAATGCGCCACGCCGTGAAGCCGCGGTTTTCAAATCTTCGGTTGATATTCAACCCGAATGGAACATGCACGACCAGATCCCGTTCTCGACTTTCTCGAAGCTTTCATTCAATGTCTCCGAACCTGAAGATCTTCTCCTCTGTGGTGCTCTTGAGTACTATGATCGTTCCTTCGATCGAATCACGCCGAAGAACGAACGCCGCCTTGAGAGGTTCAAGAACCGTAACTTCTTCAAGGTTACCACCACTGATGACCCTGTTATTCGGAGGCTCGCAAATGAGGATAAAGCTACCGTTTTTGCTACCGATACTATTCTCTCAACCCTCATGTGTGCCCCCAGGTCTGTTTATTCTTGGGATATCGTAGTTCAGCGTGTTGGGAACAAGCTATTCTTTGATAAGAGAGATGGGTCGCAGTTGGATTTGCTTTCTGTTCATGAGACTTCACAGGAGCCATTGCCTGAGGCGAAGGATGATATTAACTCTGCGCATTCCTTGAGTGTTGAGGCAGCTTATATTAATCAGAATTTCTCTCAGCAGGTTTTGATTAGGGATGGAAATAAGGTTACTTTTGATGAGCCTAACCCTTTTGCTAATGAGGGTGAAGAGGTTGCTTCTGTGGCTTATAGGTATAGGAGGTGGAAGCTTGATGATGATATGTATCTTGTTGCTAGGTGTGAGGTGCAAAGTGTTCTTGATGTGAACAAGCAAAGGTCGTTCCTCACTTTGAATGCTTTGAATGAGTTTGATCCCAAGTATTCGGGTGTTGATTGGAGGCAGAAGTTGGAGACTCAAAGGGGTGCTGTTTTGGCCACTGAGCTCAAGAACAATGCTAATAAGTTGGCTAAATGGACTGCACAAGCTCTTTTGGCAAGTGCTGATATGATGAAGTTGGGATATGTGTCTAGGATTCATCCCCGTGACCATTTTAATCATGTGATCTTGGCTGTGGTTGGATATAAACCGAGGGACTTTGCGGCACAAATTAATTTGAACACGGCCAATATGTGGGGAATTGTTAAGTCTATTGTGGACTTGTGCATGAAATTAAATGAGGGGAAATATGTTCTTGTTAAGGATCCATCTAAGCCTCAGGTTAGAATTTATGAGGTTCCAGCAGATGCATTTGAAAATGACTATGTGGAGGAGCCACTTCCTGAAGAGGAACAAGTTCAACCTCCTGCAGAGGGTGCCGATGCTGGAGAGGCTACTGCTACTACAAACGATGTGGAAGATAAGCAGATAGATGATCAAGCTTAA 1701 0.4838 MVGTFDVGAVPFNPDGWGPLDPTSGGGASNGNLPLNVPFAPFSRSDKLGRIADWTRNFNNPGRPKNPADSAFDFTNDDSFPASADDDSSFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEARKREQEKERARRDRQYHQNRSNPNAPRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSFNVSEPEDLLLCGALEYYDRSFDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVLDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEEEQVQPPAEGADAGEATATTNDVEDKQIDDQA* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00575 566 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 529 IPR007783 GO:0003743|GO:0005737|GO:0005852
Rops11g00575 566 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 7 517 IPR007783 GO:0003743|GO:0005737|GO:0005852
Rops11g00575 566 MobiDBLite consensus disorder prediction 55 155 - -
Rops11g00575 566 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 540 IPR007783 GO:0003743|GO:0005737|GO:0005852
Rops11g00575 566 MobiDBLite consensus disorder prediction 12 32 - -
Rops11g00575 566 MobiDBLite consensus disorder prediction 113 143 - -
Rops11g00575 566 Coils Coil 118 138 - -
Rops11g00575 566 PIRSF Transl_init_eIF3d 1 547 IPR007783 GO:0003743|GO:0005737|GO:0005852
Rops11g00575 566 MobiDBLite consensus disorder prediction 529 566 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00575 4 564 Eukaryotic Initiation Factors Gene Family AT4G20980 77.172 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00575 K03251 - gmx:100799613 1001.89