Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00573 ATGGAGGAAGAAACCAATTCTTGGATAAGGAGGGCAAAATTCTCTCACACAGTGTGTCATCGTTTGGATACATCTAGATTGGGTCTTTTTCCAATCAGCATTCAATCAGACAGAAATTCAAGGCCTTCTAAAAAGGTTCAGAGATACCCTACAACAAACAAGCAGAGATCTTTGTCACCATTGCCTGAAACTTTTCTTTCTGAGACCTTCAGGGAAGCAAGGCATGAACAGAAGAGGTTCTCAACACCAGGTCCTAGGAGGGACAAGAGAATCAATGGCAAGTTATCCAACAAGGATTCTAGGGAACCTAAGGTATCAAGTTCGATATCTCCTCCCAAGAGTCCAAATAGGCACATGAAGTCCAAGCACAACAAGGATTCATCATGGTCTAAGTATTTGGAAAATGGTGGTGGAGGAAAGGTTTCTGCTGTGGAAACAGCTGAGGAATGGACTATTGACATGTCTAAGCTGTTTCTTGGCTTTAAGTTTGCTCATGGGGCTCATAGTAGGCTTTACCATGGTGTGTATAAGGATGAACCTGTTGCTGTTAAAATCATTAGGGTACCTGATGATGACGAAAATGCTACCTTGGCTACTAGATTAGAGAAACAGTTCATTAGAGAAGTCACCCTTTTATCTCGCCTTTACTATCCAAATGTTATAAAGTTCGTAGCAGCAAGCAGAAAGCCACCGGTTTATTGTATTATCACAGAATATCTACCAGAAGGTTCCTTGAGGGCATATTTGCATAAGTTGGAGCATAAAACTGTTTCTCTACAAAAGCTAATAGCTTTTGCTCTGGATATTGCTCGTGGAATGGAATATATACACTCTCAAGGTGTCATTCATCGAGACCTTAAACCAGAGAATGTTCTTATTAATGAAGACTCTCACCTCAAAATTGCTGATTTTGGCATTGCTTGTGAGGAGGCAGTCTGTGACTTATTGGCTGATGACCCTGGCACCTATCGTTGGATGGCACCTGAGATGATCAAACGTAAATCCTATGGGAGAAAGGTTGATGTCTACAGTTTTGGGCTTATCTTATGGGAAATGTTGACTGGAACAATACCATATGAGGATATGAATCCAATCCAGGCTGCTTTTGCAGTAGTAAATAAGAACTCAAGGCCAGTTATTCCTTCAAACTGCCCACCTGCTATGCAAGCTTTAATTGAGCAGTGTTGGTCCTTGCATCCAGATAAAAGGCCTGATTTCTGGCAGGTTGTTAAGGTATTAGAGCAGTTTGAATCTTCACTTGCCCGTGATGGAACCCTGACTCTGGTGGAGAACCCTTGTTGCCATGATCATAAGAAAGGGCTTCTTCATTGGATTCATAAGCTTGGTCCCTTGCATCAAAATAGTGGTCCTGTGCCTAAACCCAAATTCACGTGA 1395 0.4186 MEEETNSWIRRAKFSHTVCHRLDTSRLGLFPISIQSDRNSRPSKKVQRYPTTNKQRSLSPLPETFLSETFREARHEQKRFSTPGPRRDKRINGKLSNKDSREPKVSSSISPPKSPNRHMKSKHNKDSSWSKYLENGGGGKVSAVETAEEWTIDMSKLFLGFKFAHGAHSRLYHGVYKDEPVAVKIIRVPDDDENATLATRLEKQFIREVTLLSRLYYPNVIKFVAASRKPPVYCIITEYLPEGSLRAYLHKLEHKTVSLQKLIAFALDIARGMEYIHSQGVIHRDLKPENVLINEDSHLKIADFGIACEEAVCDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMLTGTIPYEDMNPIQAAFAVVNKNSRPVIPSNCPPAMQALIEQCWSLHPDKRPDFWQVVKVLEQFESSLARDGTLTLVENPCCHDHKKGLLHWIHKLGPLHQNSGPVPKPKFT* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00573 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Rops11g00573 464 Gene3D Transferase(Phosphotransferase) domain 1 241 433 - -
Rops11g00573 464 MobiDBLite consensus disorder prediction 34 133 - -
Rops11g00573 464 Pfam Protein tyrosine and serine/threonine kinase 162 413 IPR001245 GO:0004672|GO:0006468
Rops11g00573 464 Gene3D Phosphorylase Kinase; domain 1 145 240 - -
Rops11g00573 464 CDD STKc_MAP3K-like 164 413 - -
Rops11g00573 464 SMART serkin_6 157 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00573 464 MobiDBLite consensus disorder prediction 68 101 - -
Rops11g00573 464 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 104 420 - -
Rops11g00573 464 SUPERFAMILY Protein kinase-like (PK-like) 141 413 IPR011009 -
Rops11g00573 464 ProSiteProfiles Protein kinase domain profile. 130 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00573 464 MobiDBLite consensus disorder prediction 34 64 - -
Rops11g00573 464 FunFam serine/threonine-protein kinase HT1 242 435 - -
Rops11g00573 464 PRINTS Tyrosine kinase catalytic domain signature 237 250 IPR001245 GO:0004672|GO:0006468
Rops11g00573 464 PRINTS Tyrosine kinase catalytic domain signature 340 362 IPR001245 GO:0004672|GO:0006468
Rops11g00573 464 PRINTS Tyrosine kinase catalytic domain signature 275 293 IPR001245 GO:0004672|GO:0006468
Rops11g00573 464 PRINTS Tyrosine kinase catalytic domain signature 321 331 IPR001245 GO:0004672|GO:0006468
Rops11g00573 464 PRINTS Tyrosine kinase catalytic domain signature 384 406 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00573 Rops-Chr11 7901133 7904624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00573 1 464 MAP Kinase Kinase Kinase AT5G58950 56.357 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Rops11g00573 PK_Tyr_Ser-Thr 3.2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00573 - - gmx:547826 791.571