Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00517 ATGGGCACCACAAAGTTGGAGTTAAGAAAGCCCTTGTTTTTTTATGGAAGGAAGCCTCCAAAAGGGATCAAAACCAATTGGATCATGCACAAATATAGACTTGTTGATAATTCCTTGAATTGTAGCTTAAAGCCACCTTCTATGACTGCTGATCCTGCACGCAGTGGCAAGAAGAACACCTTGAGGCTTGATGATTGGGTTTTGTGCCGAATATATAAGAAAAGCAACAATACCAGTTTGCCAAGACTACCCTTGATGGAGAAGGATAAGGAGTTTTCTACGGAGAGTATGCAACCAACGATGTCAACTTTGTCAATGGCTAATACTTATCAAAATTCCAAACCCACATCTTCCAGAAGTGCAAGTTATGGACCACTGGGACTTGAAAACGATGACAACTTCTTCGATGGAATCTTAGCGGTGATCGAGCATGCGTAA 438 0.4155 MGTTKLELRKPLFFYGRKPPKGIKTNWIMHKYRLVDNSLNCSLKPPSMTADPARSGKKNTLRLDDWVLCRIYKKSNNTSLPRLPLMEKDKEFSTESMQPTMSTLSMANTYQNSKPTSSRSASYGPLGLENDDNFFDGILAVIEHA* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00517 145 ProSiteProfiles NAC domain profile. 1 74 IPR003441 GO:0003677|GO:0006355
Rops11g00517 145 Gene3D NAC domain 2 79 IPR036093 GO:0003677|GO:0006355
Rops11g00517 145 PANTHER NAC TRANSCRIPTION FACTOR 56 6 95 - -
Rops11g00517 145 SUPERFAMILY NAC domain 7 74 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00517 Rops-Chr11 7121997 7122528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00517 3 88 NAC Transcription Factor Family AT1G61110 53.488 3.39e-25 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00517 - - gmx:100792372 199.904