Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00502 ATGGGTTGTACGAATTCGGAGTTGCATGTGCGAATCTTTGTCACCTTCATGGTGATTCTCACAGGGACTTTCTGTGTTGGAGACACTGACCTGGTTGATGTTGCAGCAATCAATAATCTATATGTTGCTCTTGGCTCACCACCTCTTCAAGGGTGGAAGCCTGTGGGAGGAGATCCTTGTTTGGAACAGTGGCAAGGTGTGGCCTGTGTCTTCTCCAACATAACTGCAATACGACTTGGAGGCATGAATTTGAGTGGACAGCTTGGCACTAATTTGAATTTTCCATCCATTATAGAAATTGATCTTAGCAACAACCACATTGGAGGGGCCATTCCATTCACTTTGCCCCCTACTCTGAGGAGTTTGTCTCTCTCAGGAAATCAATTAAATGGAAGCATTCCGGATGCCTTATCCTTATTAACCCAAATGACAAACTTGGATTTGTCAAGTAACAACTTGAGTGGTCAGCTTCCTTCCTCAACTGGGAGTTTATCATCTCTTACTACATTGCACTTGCAGAACAATCAACTTTCTGGGACCCTATATGTTTTGCAGGACCTCCCTCTTCAGGATTTGAATATAGAGAATAATTTATTCTCCGGGCCAATTCCTCCAAAATTGTTGAGTATCCCGAATTTCAGAAAAGATGGGAATCCATTTAATACAACTATTATTCCATCACCTCCTGCTGCAGCCCCTTCACCTGTAACTATGGCTCCATCCCCTGAAGGATCGCCTTGGAAAGTGGCAAATAGTCCTTCTGCCCTAACAGCATCAATGCCTGCAAGTACTAGGAAGTCTTTCGTGGCTAAGAATGTCATTTGGATTGCTGGTGCAGGTTTCTTAATATTTATTGCATTGGGAATTTGTCTTTTTATGTTGTGGTGCTTTAAGAGAAGGTCAGGAAAGAAAAGGTCTAAGAAACTTGATGTGGGTGTTTTTGCGGTGCCTTTGCATAAATCTACATGCAGTGACACTGTTTTTGAAGCCACTAATCAAGAGGAAAAAGGACCGGGTTCCAAGCTTTCACCTCTGCAGCCACCACCTCGTTCTCTCCCAACTGTTCCTGGTGAGAAGGTCATCATCAATCCGGCTACAACTACCAAAATAACCGAAAGACAAGATATGACAAGTTCCATCAAAGTTTATACTGTTGCATCACTTCAGCAATATACAAATAGCTTTTCCCAAGAAAATTGTATTGGGGAAGGAACACTTGGGCCTGTTTATAGGGCTGAGCTTCCTGATGGAAAGCTATTGGCAGTGAGGAAACTGGATGCTACTGCTTCCATGGGGCAGAATCATGAACAATTTCTTCAATTGGTATCCAGCATCTCAAAAATTCAGCATGGTAATATTGCAAAGCTTGTGGGCTACTGTGCTGAGTATAGCCAACGACTATTTGTATATGAGTATTGCAGTAATGGGACCCTACATGATGCACTGCATGGGGATGACGAACACCGTATTAAACTTCCATGGAATGCACGCATCAGGGTGGCACTTGGAGCTGCAAGAGCTTTAGAGTATCTGCATGAGAATTTTCAGCCACCTATTGTGCATCGAAATTTTAGGTCTGCTAATGTTCTCCTAAATGAAAAGTTGGAAGTACGTGTCTCTGATTGCGGATTAAGTCCTTTACTATCTTCTAGCTCTGCTGGTCAGTTATCAGGACGCCTCCTTACAGCTTATGGTTACAGTGCTCCAGAATTTGAGTCTGGAAATTATACACAGCAAAGTGATGTCTTCAGTTTTGGAGTTGTAATGCTAGAACTACTCACTGGAAGAAAATCCTATGACAGGTCACGGCCTCGTGGAGAGCAATTTTTGGTCAGATGGGCAGTCCCTCAACTCCATGACATTGATGCACTGTCAAAAATGGTTGACCCCTGCTTAAATGGAGCCTATCCTATGAAGTCCTTGTCACGTTTTGCAGATATTGTTTCTTCATGTATACAGCGTGAACCCGAATTCAGGCCAGCAATGTCAGAAATTGTTCAAGATCTGTTGCTAACGATCATAGGACCGCCACCCCCCACCACCACTGCCACCGTTGACTACCGCCAGCCACCGTTGACTGGCACCGCCGTCGTTGCCATCACCCCACCCACCACGCTGCCGCTACCCCTACCACCACCACCATCAACCGCCGCCACCACCGCTGCCAACCACAAGGATTTGTAA 2184 0.4469 MGCTNSELHVRIFVTFMVILTGTFCVGDTDLVDVAAINNLYVALGSPPLQGWKPVGGDPCLEQWQGVACVFSNITAIRLGGMNLSGQLGTNLNFPSIIEIDLSNNHIGGAIPFTLPPTLRSLSLSGNQLNGSIPDALSLLTQMTNLDLSSNNLSGQLPSSTGSLSSLTTLHLQNNQLSGTLYVLQDLPLQDLNIENNLFSGPIPPKLLSIPNFRKDGNPFNTTIIPSPPAAAPSPVTMAPSPEGSPWKVANSPSALTASMPASTRKSFVAKNVIWIAGAGFLIFIALGICLFMLWCFKRRSGKKRSKKLDVGVFAVPLHKSTCSDTVFEATNQEEKGPGSKLSPLQPPPRSLPTVPGEKVIINPATTTKITERQDMTSSIKVYTVASLQQYTNSFSQENCIGEGTLGPVYRAELPDGKLLAVRKLDATASMGQNHEQFLQLVSSISKIQHGNIAKLVGYCAEYSQRLFVYEYCSNGTLHDALHGDDEHRIKLPWNARIRVALGAARALEYLHENFQPPIVHRNFRSANVLLNEKLEVRVSDCGLSPLLSSSSAGQLSGRLLTAYGYSAPEFESGNYTQQSDVFSFGVVMLELLTGRKSYDRSRPRGEQFLVRWAVPQLHDIDALSKMVDPCLNGAYPMKSLSRFADIVSSCIQREPEFRPAMSEIVQDLLLTIIGPPPPTTTATVDYRQPPLTGTAVVAITPPTTLPLPLPPPPSTAATTAANHKDL* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00502 727 MobiDBLite consensus disorder prediction 704 727 - -
Rops11g00502 727 Gene3D Phosphorylase Kinase; domain 1 358 472 - -
Rops11g00502 727 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 143 231 - -
Rops11g00502 727 Gene3D Transferase(Phosphotransferase) domain 1 473 672 - -
Rops11g00502 727 SUPERFAMILY Protein kinase-like (PK-like) 375 672 IPR011009 -
Rops11g00502 727 Pfam Protein tyrosine and serine/threonine kinase 398 669 IPR001245 GO:0004672|GO:0006468
Rops11g00502 727 ProSiteProfiles Leucine-rich repeat profile. 118 140 IPR001611 GO:0005515
Rops11g00502 727 MobiDBLite consensus disorder prediction 331 357 - -
Rops11g00502 727 ProSiteProfiles Protein kinase domain profile. 395 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00502 727 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 473 674 - -
Rops11g00502 727 SUPERFAMILY L domain-like 34 212 - -
Rops11g00502 727 Gene3D Ribonuclease Inhibitor 35 229 IPR032675 -
Rops11g00502 727 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 669 IPR046959 -
Rops11g00502 727 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 142 - -
Rops11g00502 727 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 362 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00502 Rops-Chr11 6869298 6890457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00502 33 673 Strubbelig Receptor Gene Family AT4G03390 51.569 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Rops11g00502 PK_Tyr_Ser-Thr 3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00502 - - gmx:100793423 1023.08