LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops11g00502	ATGGGTTGTACGAATTCGGAGTTGCATGTGCGAATCTTTGTCACCTTCATGGTGATTCTCACAGGGACTTTCTGTGTTGGAGACACTGACCTGGTTGATGTTGCAGCAATCAATAATCTATATGTTGCTCTTGGCTCACCACCTCTTCAAGGGTGGAAGCCTGTGGGAGGAGATCCTTGTTTGGAACAGTGGCAAGGTGTGGCCTGTGTCTTCTCCAACATAACTGCAATACGACTTGGAGGCATGAATTTGAGTGGACAGCTTGGCACTAATTTGAATTTTCCATCCATTATAGAAATTGATCTTAGCAACAACCACATTGGAGGGGCCATTCCATTCACTTTGCCCCCTACTCTGAGGAGTTTGTCTCTCTCAGGAAATCAATTAAATGGAAGCATTCCGGATGCCTTATCCTTATTAACCCAAATGACAAACTTGGATTTGTCAAGTAACAACTTGAGTGGTCAGCTTCCTTCCTCAACTGGGAGTTTATCATCTCTTACTACATTGCACTTGCAGAACAATCAACTTTCTGGGACCCTATATGTTTTGCAGGACCTCCCTCTTCAGGATTTGAATATAGAGAATAATTTATTCTCCGGGCCAATTCCTCCAAAATTGTTGAGTATCCCGAATTTCAGAAAAGATGGGAATCCATTTAATACAACTATTATTCCATCACCTCCTGCTGCAGCCCCTTCACCTGTAACTATGGCTCCATCCCCTGAAGGATCGCCTTGGAAAGTGGCAAATAGTCCTTCTGCCCTAACAGCATCAATGCCTGCAAGTACTAGGAAGTCTTTCGTGGCTAAGAATGTCATTTGGATTGCTGGTGCAGGTTTCTTAATATTTATTGCATTGGGAATTTGTCTTTTTATGTTGTGGTGCTTTAAGAGAAGGTCAGGAAAGAAAAGGTCTAAGAAACTTGATGTGGGTGTTTTTGCGGTGCCTTTGCATAAATCTACATGCAGTGACACTGTTTTTGAAGCCACTAATCAAGAGGAAAAAGGACCGGGTTCCAAGCTTTCACCTCTGCAGCCACCACCTCGTTCTCTCCCAACTGTTCCTGGTGAGAAGGTCATCATCAATCCGGCTACAACTACCAAAATAACCGAAAGACAAGATATGACAAGTTCCATCAAAGTTTATACTGTTGCATCACTTCAGCAATATACAAATAGCTTTTCCCAAGAAAATTGTATTGGGGAAGGAACACTTGGGCCTGTTTATAGGGCTGAGCTTCCTGATGGAAAGCTATTGGCAGTGAGGAAACTGGATGCTACTGCTTCCATGGGGCAGAATCATGAACAATTTCTTCAATTGGTATCCAGCATCTCAAAAATTCAGCATGGTAATATTGCAAAGCTTGTGGGCTACTGTGCTGAGTATAGCCAACGACTATTTGTATATGAGTATTGCAGTAATGGGACCCTACATGATGCACTGCATGGGGATGACGAACACCGTATTAAACTTCCATGGAATGCACGCATCAGGGTGGCACTTGGAGCTGCAAGAGCTTTAGAGTATCTGCATGAGAATTTTCAGCCACCTATTGTGCATCGAAATTTTAGGTCTGCTAATGTTCTCCTAAATGAAAAGTTGGAAGTACGTGTCTCTGATTGCGGATTAAGTCCTTTACTATCTTCTAGCTCTGCTGGTCAGTTATCAGGACGCCTCCTTACAGCTTATGGTTACAGTGCTCCAGAATTTGAGTCTGGAAATTATACACAGCAAAGTGATGTCTTCAGTTTTGGAGTTGTAATGCTAGAACTACTCACTGGAAGAAAATCCTATGACAGGTCACGGCCTCGTGGAGAGCAATTTTTGGTCAGATGGGCAGTCCCTCAACTCCATGACATTGATGCACTGTCAAAAATGGTTGACCCCTGCTTAAATGGAGCCTATCCTATGAAGTCCTTGTCACGTTTTGCAGATATTGTTTCTTCATGTATACAGCGTGAACCCGAATTCAGGCCAGCAATGTCAGAAATTGTTCAAGATCTGTTGCTAACGATCATAGGACCGCCACCCCCCACCACCACTGCCACCGTTGACTACCGCCAGCCACCGTTGACTGGCACCGCCGTCGTTGCCATCACCCCACCCACCACGCTGCCGCTACCCCTACCACCACCACCATCAACCGCCGCCACCACCGCTGCCAACCACAAGGATTTGTAA	2184	0.4469	MGCTNSELHVRIFVTFMVILTGTFCVGDTDLVDVAAINNLYVALGSPPLQGWKPVGGDPCLEQWQGVACVFSNITAIRLGGMNLSGQLGTNLNFPSIIEIDLSNNHIGGAIPFTLPPTLRSLSLSGNQLNGSIPDALSLLTQMTNLDLSSNNLSGQLPSSTGSLSSLTTLHLQNNQLSGTLYVLQDLPLQDLNIENNLFSGPIPPKLLSIPNFRKDGNPFNTTIIPSPPAAAPSPVTMAPSPEGSPWKVANSPSALTASMPASTRKSFVAKNVIWIAGAGFLIFIALGICLFMLWCFKRRSGKKRSKKLDVGVFAVPLHKSTCSDTVFEATNQEEKGPGSKLSPLQPPPRSLPTVPGEKVIINPATTTKITERQDMTSSIKVYTVASLQQYTNSFSQENCIGEGTLGPVYRAELPDGKLLAVRKLDATASMGQNHEQFLQLVSSISKIQHGNIAKLVGYCAEYSQRLFVYEYCSNGTLHDALHGDDEHRIKLPWNARIRVALGAARALEYLHENFQPPIVHRNFRSANVLLNEKLEVRVSDCGLSPLLSSSSAGQLSGRLLTAYGYSAPEFESGNYTQQSDVFSFGVVMLELLTGRKSYDRSRPRGEQFLVRWAVPQLHDIDALSKMVDPCLNGAYPMKSLSRFADIVSSCIQREPEFRPAMSEIVQDLLLTIIGPPPPTTTATVDYRQPPLTGTAVVAITPPTTLPLPLPPPPSTAATTAANHKDL*	728

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Rops11g00502	727	MobiDBLite	consensus disorder prediction	704	727	-	-
Rops11g00502	727	Gene3D	Phosphorylase Kinase; domain 1	358	472	-	-
Rops11g00502	727	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 3	143	231	-	-
Rops11g00502	727	Gene3D	Transferase(Phosphotransferase) domain 1	473	672	-	-
Rops11g00502	727	SUPERFAMILY	Protein kinase-like (PK-like)	375	672	IPR011009	-
Rops11g00502	727	Pfam	Protein tyrosine and serine/threonine kinase	398	669	IPR001245	GO:0004672\|GO:0006468
Rops11g00502	727	ProSiteProfiles	Leucine-rich repeat profile.	118	140	IPR001611	GO:0005515
Rops11g00502	727	MobiDBLite	consensus disorder prediction	331	357	-	-
Rops11g00502	727	ProSiteProfiles	Protein kinase domain profile.	395	671	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Rops11g00502	727	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 8	473	674	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops11g00502	Rops-Chr11	6869298	6890457	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops11g00502	33	673	Strubbelig Receptor Gene Family	AT4G03390	51.569	0.0	637

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-V	Rops11g00502		PK_Tyr_Ser-Thr	3e-41	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops11g00502	-		-	gmx:100793423	1023.08

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