Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00479 ATGCAAACTAGGTATATGGAGAGATCGAGCAGTATGGCGAGGGAGAAGCGAGGCTTAGATTCAAGTGCGAATGAGGAAGACCAGCCTGAAAGGAAGCGACCTGCTTTGGCTAGTGTAATTGTTGAAGCCCTGAAGGTGGACAGTCTGCAGAAACTTTGCTCATCACTGGAGCCTATCCTACGGAGAGTTGTCAGTGAAGAAGTGGAGCGTGCTTTAGCAAAATTAGGCCCTGCCAAGCCTAGTGGGAGGTCTTCTCCCAAGTGCATACAGGGCCCTGATGGCAGCAATTTACAATTACAATTCAAGACCAGGTTATCTCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGGGAGCAGGGCAGTGCCATACATATTGTTTTGATTGATACAAACACAGGCCTTGTTGTCACATCTGGCCCAGCATCATGTGTCAAACTAGACATTATTGTACTTGAAGGGGATTTCAATAATGAGGATGATGATAATTGGAGTGAAGAAGAATTTGAGAGCCATGTTGTGAAAGAACGAGAAGGGAAAAGACCTCTTCTGACTGGTGACCTGCAAGTGACACTGAAGGAGGGTGTAGGAACACTGGGTGATCTTACATTTACAGACAACTCGAGCTGGATAAGGAGTCGAAAGTTCCGCCTGGGGCTCAAAGTTTCCTTGGGTGGTTGTGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCACCGTGGAGAATTATACAAGAAACACTACCCACCTGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGGTCCTTTCACAAAAGACTAAATAAAGCAGGAATATATACTGTTGAAGATGTCCTACGACTTGTGGTCAGAGACCCACAGAGATTACGGAATATTCTTGGTAGCGGCATGTCAAATAAAATGTGGGATGTTCTTGTTGAGCATGCAAAGACTTGTGTTCTTAGTGGAAAACTCTATGTATACTATCCTGATGATGCAAGGAATGTTGGTGTTGTTTTCAATAACATCTATGAGTTGAGCGGCTTAATTGCAGATGACCAATTCTACTCTGCTGATTCTCTCTCTGACAGTCAAAAGGTTTATGTGGACACATTGGTGAAGAAAGCATATGAGAATTGGATGCATGTTATTGAGTATGATGGCAAGTCTCTTCTAATTTACAATCAGCATAATACTTTGGGCACCTCCCAACCTCAGGCTCCAGTGGGTTCCCATAATTATTCAAATTCAAACTCACTTGATAAGCAGATCTCCATCCCAAGTCTATCAGTTCCCGTACCTACAGGGCAGCCTCCAATGGATCCAGGAGTAACAGTTGGAGGTTATCATGATGGTACGACTCCCAGATTCTCAATGCAACCACAGAATGATAATCTTAATTCTTCTATTCAGTTTGATAATACTGCATTCCCACTACAAAACCAGCTGATGAACACTTCACACCAATCTCAACTTCCCAGAAATGAAAATGAGCTGACTCTTGGTCCACCACAATCAGCCACTCCTGGCTTTCAGACTGTCAGCATATCAAATCCTACTTATAGAGTTGAAGATTTCTTCCCAGAAGAGGAGATCCGTATTCGAAGTCATGAGATGCTAGAAAATGAAGATATGCAGCATCTGCTCCGTATTTTTAATATGGGAGGGCAATCTCATACTTCCTTTAATGCTCCTGAAGATGGATACCCTTATTCATCTCCTTACATGCCTGCAACCTCCATGAACTACAACTTAGGTGACGAGCGAAACCGTTCCTCAGGAAAGGCTGTTGTGGGCTGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAGGGCTGCTGAGAGACGGGCACAACTTGTTGAGCTGGATGACTCATAG 1902 0.4432 MQTRYMERSSSMAREKRGLDSSANEEDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKPSGRSSPKCIQGPDGSNLQLQFKTRLSLPLFTGGKVEGEQGSAIHIVLIDTNTGLVVTSGPASCVKLDIIVLEGDFNNEDDDNWSEEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVSLGGCEGMRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYTVEDVLRLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELSGLIADDQFYSADSLSDSQKVYVDTLVKKAYENWMHVIEYDGKSLLIYNQHNTLGTSQPQAPVGSHNYSNSNSLDKQISIPSLSVPVPTGQPPMDPGVTVGGYHDGTTPRFSMQPQNDNLNSSIQFDNTAFPLQNQLMNTSHQSQLPRNENELTLGPPQSATPGFQTVSISNPTYRVEDFFPEEEIRIRSHEMLENEDMQHLLRIFNMGGQSHTSFNAPEDGYPYSSPYMPATSMNYNLGDERNRSSGKAVVGWLKLKAALRWGIFIRKRAAERRAQLVELDDS* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00479 633 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
Rops11g00479 633 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
Rops11g00479 633 MobiDBLite consensus disorder prediction 1 33 - -
Rops11g00479 633 MobiDBLite consensus disorder prediction 9 33 - -
Rops11g00479 633 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Rops11g00479 633 PANTHER OS02G0177800 PROTEIN 12 548 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00479 Rops-Chr11 6558105 6565119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00479 9 628 Calmodulin-binding Proteins AT5G57580 62.461 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00479 - - gmx:100802994 1086.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01990 2 31567986 31573615 Rops11g00479 11 6558105 6565119 PCT