Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00458 ATGGATTTTGATCTTGAAGACCCACTAGCCAGCTTCAAAGAACAGCAAATTTGTACTATGTCAGAACTCTTTGCCTCGGAAACTGGTCACATGCCCTCACCAAACTGCTTAAATTCAACTCAGTTTCTCATTTCCTTCCGTTGTGAAGCCATTTCTCTCATACTTCAGGTTCAGCTTTCTTGCAATTTGGACCCATTTGTAGCTTATCTTGCTATAAATTACTTGCATCGTTTCATGTCAAGGCAGGAGATTCCACAGGGGAAGCCGTGGTTACTCAGGTTTGTTGTCATATCCTGTCTTACTCTAGCTTCAAAGATGAAGAACACACCTTTATCATTTTCCGAAATGCAGAAAGTAGGTTGCAACTTTGAGGCTCAAAGTATTCAGAGAATGGAACTTGTTATTCTTGGGGCACTGAATTGGCGTATGAGGTCAATTACACCTTTTCCTTTCTTGCATTTCTTCATCTCTTTAGCTGAAATCAAAGACCAATCACAGAAGCAAGCACTAAAAGAGCGAGCTTCAGAGATAATCTTCAATTCTCATAATGACATTAAGTTTTTAGAGCATAAACCTTCAACTATTGCAGCAACTGCCCTAATCTATGCATCTCAAGAACTATTCCCGCAGATATTTTCTATTCTGAGAGCTTCAATTACAGCTTGTGAGTATCTAGACAAGGAGACATTGTCCAAGTGCTTTGATTTGATGCAAGAGATGATGAGAATGGAAGCAATGGAGTTAATGATAGATACAAGTTTCTTAAGCACTGAAACTCCAGTGAGTGTGCTGGAGAGAAGCACCTAA 807 0.3965 MDFDLEDPLASFKEQQICTMSELFASETGHMPSPNCLNSTQFLISFRCEAISLILQVQLSCNLDPFVAYLAINYLHRFMSRQEIPQGKPWLLRFVVISCLTLASKMKNTPLSFSEMQKVGCNFEAQSIQRMELVILGALNWRMRSITPFPFLHFFISLAEIKDQSQKQALKERASEIIFNSHNDIKFLEHKPSTIAATALIYASQELFPQIFSILRASITACEYLDKETLSKCFDLMQEMMRMEAMELMIDTSFLSTETPVSVLERST* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00458 268 FunFam D6-type cyclin 142 235 - -
Rops11g00458 268 SUPERFAMILY Cyclin-like 21 143 IPR036915 -
Rops11g00458 268 FunFam D6-type cyclin 32 141 - -
Rops11g00458 268 SMART cyclin_7 52 137 IPR013763 -
Rops11g00458 268 PANTHER CYCLINS 32 240 IPR039361 -
Rops11g00458 268 Gene3D - 33 144 - -
Rops11g00458 268 Pfam Cyclin, C-terminal domain 146 241 IPR004367 -
Rops11g00458 268 CDD CYCLIN_AtCycD-like_rpt2 146 237 - -
Rops11g00458 268 Gene3D - 22 235 - -
Rops11g00458 268 SMART Cyclin_C_2 146 267 IPR004367 -
Rops11g00458 268 SUPERFAMILY Cyclin-like 128 242 IPR036915 -
Rops11g00458 268 Pfam Cyclin, N-terminal domain 22 143 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00458 Rops-Chr11 6185769 6187707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00458 1 266 Core Cell Cycle Gene Families AT4G03270 41.786 2.08e-61 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00458 K18812 - gmx:100799985 424.861