Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00455 ATGAAGAAGTGTGAGCTGTGTAACTGTCCTGCAAAGTTGTTCTGTCCATCAGATCAAGCAAGCCTTTGTTGGGAATGTGATGCAAAGGTTCACACTGCAAATTTTCTAGTCACAAAGCACCCCAGGATTCTTCTCTGTCATATTTGTCAATCTCTAACAGCTTGGCATGGCACCGGACCCAAGTTTGTTCCCACCATCTCCGTTTGCAGCAACTGTGTTACCAACCAACGGAACCATGATGATGATGATGATGGTACTGAGGAGGATGGTGTAGAAAAAGATGATGATGATGAAGAAGAAGATCAAGTGGTTCCACCTTGGACATCTACTCCACCACCACCAGTTTCTAGTTCTTCAAATAGTGCAACTAGTTCTACCAGGTTCTCTAATGGTGAATAA 399 0.4361 MKKCELCNCPAKLFCPSDQASLCWECDAKVHTANFLVTKHPRILLCHICQSLTAWHGTGPKFVPTISVCSNCVTNQRNHDDDDDGTEEDGVEKDDDDEEEDQVVPPWTSTPPPPVSSSSNSATSSTRFSNGE* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00455 132 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Rops11g00455 132 CDD Bbox1_BBX-like 3 45 - -
Rops11g00455 132 MobiDBLite consensus disorder prediction 75 132 - -
Rops11g00455 132 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Rops11g00455 132 MobiDBLite consensus disorder prediction 82 103 - -
Rops11g00455 132 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 125 - -
Rops11g00455 132 MobiDBLite consensus disorder prediction 114 132 - -
Rops11g00455 132 SMART bboxneu5 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00455 Rops-Chr11 6164498 6165056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00455 2 103 C2C2-CO-like Transcription Factor Family AT4G27310 52.381 9.54e-31 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops11g00455 zf-B_box 1.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00455 - - gmx:100805832 162.155