Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00450 ATGATGGTAGTCATCAACCATGCAAGTTTCTTATCAATTTTAATCATATTTTGTTGCCTATGTTTAGATTTTGGTACTGCCACACACACCATCACTTCATCTCAATACATCAAAGACCCTGAAACTCTAAGCTCCAATAATAGTAAGTTCACTTTAGGATTTTTCAGACATGACAATTCTGCGGATCGCTACGTGGGCATATGGCACATGTCCAAATCCACTGTTGTATGGGTAGCTAACAGAAACCAACCACTCAGGGATTCTTCAGGGAGTTTTACAATATTCAATGATGGCAATCTTGTGGTTTTGGATGGAACAAAACAGGTGATTTGGTCGTCAAATGTAACCAATATTGAAACTAATTCCAGTTCCCAACTTTTAGATTCTGGGAACCTTGTCCTCCTGGATAGTACAGGAAAGACAATATGGGAGAGTTTTAACCATCCTACAGATACTTTGCTGCCAAACATGAAAATTACAAGCAACAGAAGAACCGGTGAGAAAGTTCAGATGACATCATGGAAAAGCCCTTCTGATCCATCCATTGGAAACTTCTCTCTAAGTTTTGGACCCCTTAGTATTCCAGAAGGGTTCATTTGGAAGGAAACTCGCCCATACTGGCGCACTGGTCCATGGAATGGTCAGGTCTTTATAGGGATACCTCAGATGAATTCTTCATATCTTAATGGATTCGACGTAGGTGATGAAGGGGATGACACTTTTTATCTCACTTATTCTTATGCAAATGAATCTCTTTTGGCAGTGTTTGTCTTGAACTGGCAGGGAATATTTGAGCGAAAAGACTGGGATGATGAGAAGAAGGAATGGCAAGTTGAGTGGAAATCTCAAACCTCTGAGTGTGATGTTTATGGTAAATGTGGGGCATTTGGGATCTGTAGTTCAGAGAGTTCACCAATATGCAGCTGTTTGGGAGGGTTTGAACCAAGTAATAGAGAAGAATGGAATAGACAAAACTGGACTAATGGATGTGTAAGGAGAACAGCTCTGCAGTGTGAAAGTGCCAAAAGTCAAAATGGGAGCAAAACGGATGATGGATTTCAGAAACTGCAGATGATAAAAGTTCCGGACTTTGTGGATTGGTCATGGGTTAAAAATGAAGACACATGCAGAAACCAATGCTTGGAAAACTGCACTTGCATTGCGTATTCGTATGATGCTGGGATTGGTTGTATGTCATGGAGTGGAAATCTCATTGACATACAACAATTTACAATTGGGGCGAATGACCTATATATTCGTCTAGCCAATTCAGACCTTGGTATCAATGATAAAAAGAGAGATGTCACAGCCATCATCACTATTACAGTAATAGTAGGAATGGTCATAATTGTCACCTGTACATATTTCTTCTGGAAACATTTGGCTAGAAAAAGGAAGAGAGAATGGTTATCTCGGTTCAATAGAGGTGAAGCACCAGCTGCAAATAGAAGTGACAGTGGAGAACTGTCAGGAGTTGAACTGCAGGAGCTATTACTATTTGACGCGGAAAAGCTTGCAATTGCCACAAACAACTTCCACTCATCCAACAAACTCGGGCAGGGTGGTTTTGGTCCAGTATACAAGGGGAAACTAAAAGACGGCCAGGAAATAGCAGTCAAAAGACTTTCTAGAGCATCTGGACAAGGATTAGAAGAATTCATGAATGAGGTAGTGGTGATTTCTAAGCTTCAACATCGCAATCTAGTAAGACTTCTTGGCTGCTGCAGAGAAGGAGATGAAAAGATGTTAATCTATGAGTACATGCCAAATAAAAGTTTGGACTCATTTGTCTTCGATCCACCTGAGCATAAATTCTTAGATTGGATAAAACGCTTTAGCATAATAGAAGGAATAGCTCGAGGTTTGCTTTATCTTCACAGAGATTCTAGGCTAAAAATCATTCATAGAGATTTGAAAGCAGGTAATATCTTGCTTGATGAGGACCTAAATCCAAAAATATCAGACTTTGGTTTGGCCAAAATATTTGGAGGGCGTGGAGATCAAGCTAACACTGGAAGGGTTGTTGGAACATATGGCTATATGGCGCCTGAATATGCAATGGAAGGATTGTTTTCAGTGAAATCAGATGTCTTTAGTTTCGGAGTTTTGTTACTAGAGATTGTCAGTGGAAGAAAAAACTCAAGCTTTTATAACAATGAGCAGTCTTTGAGTCTTTTAGGATTTGCGTGGAAAGTATGGAATGAAGACAATATTGTATCTCTAATAGATCCAGGAATATGTGGCTCCAACCGTGAGAAGGATATTTTGAGGTGCATACACATAGGACTTCTGTGTGTTCAAGAAAGCGCAAGAGACAGGCCCACCATGGCCTCCGTAATTTCTATGCTTAACAGTGAAATTGTGAATCTTCCTCCACCAAGGCAGCCTGCATTCATCATGAGGCAGAATATGTTAAACTCATCGTCCTCTGAAGATTTTCATAAACTGCTTTCAAACAACAGTGTCACTATTACATGTATCCAAGGCAGATAA 2493 0.3999 MMVVINHASFLSILIIFCCLCLDFGTATHTITSSQYIKDPETLSSNNSKFTLGFFRHDNSADRYVGIWHMSKSTVVWVANRNQPLRDSSGSFTIFNDGNLVVLDGTKQVIWSSNVTNIETNSSSQLLDSGNLVLLDSTGKTIWESFNHPTDTLLPNMKITSNRRTGEKVQMTSWKSPSDPSIGNFSLSFGPLSIPEGFIWKETRPYWRTGPWNGQVFIGIPQMNSSYLNGFDVGDEGDDTFYLTYSYANESLLAVFVLNWQGIFERKDWDDEKKEWQVEWKSQTSECDVYGKCGAFGICSSESSPICSCLGGFEPSNREEWNRQNWTNGCVRRTALQCESAKSQNGSKTDDGFQKLQMIKVPDFVDWSWVKNEDTCRNQCLENCTCIAYSYDAGIGCMSWSGNLIDIQQFTIGANDLYIRLANSDLGINDKKRDVTAIITITVIVGMVIIVTCTYFFWKHLARKRKREWLSRFNRGEAPAANRSDSGELSGVELQELLLFDAEKLAIATNNFHSSNKLGQGGFGPVYKGKLKDGQEIAVKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLLGCCREGDEKMLIYEYMPNKSLDSFVFDPPEHKFLDWIKRFSIIEGIARGLLYLHRDSRLKIIHRDLKAGNILLDEDLNPKISDFGLAKIFGGRGDQANTGRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIVSGRKNSSFYNNEQSLSLLGFAWKVWNEDNIVSLIDPGICGSNREKDILRCIHIGLLCVQESARDRPTMASVISMLNSEIVNLPPPRQPAFIMRQNMLNSSSSEDFHKLLSNNSVTITCIQGR* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00450 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 146 - -
Rops11g00450 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 588 791 - -
Rops11g00450 830 PIRSF SRK 1 830 IPR024171 GO:0004674
Rops11g00450 830 Gene3D - 24 147 IPR036426 -
Rops11g00450 830 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Rops11g00450 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Rops11g00450 830 SMART ntp_6 348 421 IPR003609 -
Rops11g00450 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 479 587 - -
Rops11g00450 830 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Rops11g00450 830 Pfam PAN-like domain 348 407 IPR003609 -
Rops11g00450 830 Pfam Domain of unknown function (DUF3403) 785 830 IPR021820 GO:0004674
Rops11g00450 830 Gene3D Phosphorylase Kinase; domain 1 478 587 - -
Rops11g00450 830 Gene3D Transferase(Phosphotransferase) domain 1 588 789 - -
Rops11g00450 830 CDD STKc_IRAK 518 784 - -
Rops11g00450 830 CDD B_lectin 34 149 IPR001480 -
Rops11g00450 830 SUPERFAMILY Protein kinase-like (PK-like) 497 816 IPR011009 -
Rops11g00450 830 SMART blect_4 34 149 IPR001480 -
Rops11g00450 830 ProSiteProfiles Protein kinase domain profile. 512 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00450 830 CDD PAN_AP_plant 334 422 - -
Rops11g00450 830 Pfam D-mannose binding lectin 74 175 IPR001480 -
Rops11g00450 830 SMART serkin_6 512 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00450 830 ProSiteProfiles PAN/Apple domain profile. 338 422 IPR003609 -
Rops11g00450 830 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 773 - -
Rops11g00450 830 Pfam Protein tyrosine and serine/threonine kinase 514 783 IPR001245 GO:0004672|GO:0006468
Rops11g00450 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 180 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00450 Rops-Chr11 6075130 6078800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00450 431 801 Receptor kinase-like Gene Family AT4G05200 51.482 8.40e-127 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g00450 PK_Tyr_Ser-Thr 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00450 - - qsu:112006095 1042.34