Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00445 ATGGATTTTAGAACTCATACCAACTTCATAACTGTTCTGCTCATAGTTTCCTGCTTTGGTCTCTGCTTGAGTTCTGCCAACGACACCATTACTTCAGCCCAATTCATTAGAGACCCTGACACACTAAGCTCAAACAACAGTCACAAGTTAGGATTCTTCAGCCCTGAAAATTCAACAAATCGTTATGTGGGAATCTGGTATCTCTCTGAATCCAATGTTATATGGGTAGCTAACAGAAACCAGCCACTCCCAAAAAAGTCTTCTGGGATTATTAAAATTTCCGGGGATGGCAATCTTGTGGTATTAAATAGCAAGAACAAGGCTGTTTGGTCATCAAATGTGACACATATTGCAACCAATTCAACTGCCAAACTTTTAGAGAGCGGAAATCTAGTCCTTCTTGATGGTGCCACAGGAGAAGTTATGTGGGAGAGTTTCAAACATCCTTGTCATGCTTTTGTGCCAAAGATGAAACTCAGTACCAACAGAATAACGGGTGAGAAAGTACACATAACATCATGGAAAAGCCCTTCTGATCCATCTGTTGGGTACTATTCTCTTACTCTTGAACACCTCAATGCTCCTGAAGTGTTTTTCTGGGTTAATGGAACCGTTCCATACGGTCGGTCTGGTCCATGGAATGGTCGGATTTTCATTGGGTCTCCTCAGATGACACCTGGGTATCTTTTAGATGGATGGAGTGTGATGAGTGAAGATGATGGAACTGTTTATCTTTCTTATAATTTCGTGAATCATTCTCAGTTTGAAATCGTGACCTTGAATCCACAGGGCAAACTAACAGGCACATGGTGGAACAGCGAAAAGGAAGTGTGGAGTGAGGTGTACAACGGAACTTCTTGCGATCGGTATGGCATATGTGGGGCATTTGGAAGCTGTGATTTGCAGAGTTCACCAATATGCAGCTGTTTGAATGGCTATAAAGCCAGAAATCTAGAGGAGTGGAATAGGGAAAATTGGACTAGAGGGTGTGTAAGGAAGGAGCCACTGCAATGTGGGAGACATAAAAATGGAAGTGAAGTTAGCAAAGATGGGTTTTTGAAACTTCAGAATATGAAAGTGCCCGACTTTGCAGAGAGGTCATCTTCTTTGGAAGGTGAATGCAGAGCTATTTGCTTGGAGAATTGCTCTTGCGTGGCATATGCATATGAGAGTGGTATTGGATGCATGATTTGGAGCGGAGACTTGATAGACATGCAGAGATTCTCAAGTGGAGGAGTTGATCTTTACATTCGTGTCCCACCTTCAGTACTCGAAAAAGATTCAGATAAAAGACGAGACAAGAGATTATTCATTGCAATTGGCGTGACAATAGGAATGATTACCTTAGCTGGCTGTGTTTATCTCTTGTGGAAATGGACTGCTAAATCTAGAGGAGAATTATATTCACGAAGACAAAGAATGAACGAAGACCAGAAACAAGACAAACTGGATGATCAACTACCGGTTTTTAATTTTAAAGAGCTTGCAACTGCCACAAACAATTTTCACTCAGCTAACGTGCTTGGGAAAGGTGGTTTTGGTTTGGTATATATGGGAAAACTGAAAGGTGTACAAGAGATAGCAGTGAAAAGACTTTCAAAGACATCTGGACAAGGGTTAGAAGAATTTATGAACGAGGTATTAGTGATTTCAAAGCTTCAGCATCGTAATCTTGTGAGACTTCTTGGCTGTTGTATTGAACAAGAGGAAAAGATGTTGATCTATGAGTATATGCCTAACAAGAGTTTGGATGCATGGTTGTTTCATCCAATAAAAAAGAAGGATCTAGATTGGCCAAAACGCTTCAATATAATTGAAGGAATCTCTCGAGGTTTGCTTTATCTACATAGAGATTCTAGACTAAAAATTATACATCGAGATCTGAAGGTTAGTAACATTTTGTTGGATGGAGAGATGAATCCAAAAATATCTGACTTTGGCATGGCTAGAATCTTTGGAGGCAATGATACACAAGCCAACACTAAAAGAGTTGTTGGAACATTTGGCTATATGCCTCCAGAATATGCATTCCAAGGGTTATTTTCAGAGAAATCGGATGTCTTTAGCTTTGGAGTCATGTCATTGGAGATCATTAGTGGAAGAAAAATCAATAGTTATTACGATCATGACCAATCATTGAGTCTTTTAGGATTTGCATGGAAATTATGGAACGAGAATGACAATCAAGCCTTGATAGACCGAGAAATATACAATTCAGACCATATTAAAGACATCTTGAGATGTATACACATTACGCTTCTTTGTGTGCAAGAACTTGCAAAAGAGAGGCCCACTGTGGCAACAGTGGTTTCAATGCTTAATAGTGAGACTGTCAATCTTCCTCTCCCATCACATCCCGCATTCATCGAAAGGCAAATTGTATGGTGTGCTAAGTCATCTCCACAGAACAATAGAACAAACTCTATCAACGATGTTACTATCACAAACATGCAAGGTAGATAG 2463 0.3999 MDFRTHTNFITVLLIVSCFGLCLSSANDTITSAQFIRDPDTLSSNNSHKLGFFSPENSTNRYVGIWYLSESNVIWVANRNQPLPKKSSGIIKISGDGNLVVLNSKNKAVWSSNVTHIATNSTAKLLESGNLVLLDGATGEVMWESFKHPCHAFVPKMKLSTNRITGEKVHITSWKSPSDPSVGYYSLTLEHLNAPEVFFWVNGTVPYGRSGPWNGRIFIGSPQMTPGYLLDGWSVMSEDDGTVYLSYNFVNHSQFEIVTLNPQGKLTGTWWNSEKEVWSEVYNGTSCDRYGICGAFGSCDLQSSPICSCLNGYKARNLEEWNRENWTRGCVRKEPLQCGRHKNGSEVSKDGFLKLQNMKVPDFAERSSSLEGECRAICLENCSCVAYAYESGIGCMIWSGDLIDMQRFSSGGVDLYIRVPPSVLEKDSDKRRDKRLFIAIGVTIGMITLAGCVYLLWKWTAKSRGELYSRRQRMNEDQKQDKLDDQLPVFNFKELATATNNFHSANVLGKGGFGLVYMGKLKGVQEIAVKRLSKTSGQGLEEFMNEVLVISKLQHRNLVRLLGCCIEQEEKMLIYEYMPNKSLDAWLFHPIKKKDLDWPKRFNIIEGISRGLLYLHRDSRLKIIHRDLKVSNILLDGEMNPKISDFGMARIFGGNDTQANTKRVVGTFGYMPPEYAFQGLFSEKSDVFSFGVMSLEIISGRKINSYYDHDQSLSLLGFAWKLWNENDNQALIDREIYNSDHIKDILRCIHITLLCVQELAKERPTVATVVSMLNSETVNLPLPSHPAFIERQIVWCAKSSPQNNRTNSINDVTITNMQGR* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00445 820 Gene3D Phosphorylase Kinase; domain 1 475 577 - -
Rops11g00445 820 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Rops11g00445 820 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 764 - -
Rops11g00445 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 146 - -
Rops11g00445 820 Pfam PAN-like domain 347 405 IPR003609 -
Rops11g00445 820 SMART serkin_6 502 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00445 820 Pfam Protein tyrosine and serine/threonine kinase 505 772 IPR001245 GO:0004672|GO:0006468
Rops11g00445 820 CDD PAN_AP_plant 335 420 - -
Rops11g00445 820 SMART blect_4 33 149 IPR001480 -
Rops11g00445 820 ProSiteProfiles PAN/Apple domain profile. 338 420 IPR003609 -
Rops11g00445 820 Pfam S-locus glycoprotein domain 209 316 IPR000858 GO:0048544
Rops11g00445 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 577 - -
Rops11g00445 820 CDD STKc_IRAK 508 774 - -
Rops11g00445 820 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Rops11g00445 820 PIRSF SRK 1 820 IPR024171 GO:0004674
Rops11g00445 820 Pfam D-mannose binding lectin 73 175 IPR001480 -
Rops11g00445 820 ProSiteProfiles Protein kinase domain profile. 502 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00445 820 Gene3D - 22 147 IPR036426 -
Rops11g00445 820 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Rops11g00445 820 CDD B_lectin 41 149 IPR001480 -
Rops11g00445 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Rops11g00445 820 SUPERFAMILY Protein kinase-like (PK-like) 484 804 IPR011009 -
Rops11g00445 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Rops11g00445 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 215 IPR036426 -
Rops11g00445 820 Gene3D Transferase(Phosphotransferase) domain 1 578 780 - -
Rops11g00445 820 SMART ntp_6 347 419 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00445 Rops-Chr11 6026094 6030856 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00445 490 820 Receptor kinase-like Gene Family AT4G11530 55.917 1.43e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g00445 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00445 - - gmx:106794168 1242.64