Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00444 ATGGGATTCACAAGTCACACTAGCTTGGTAAACGCTTTGCTCATATTTTCTATAATTTTTCTGGGTTTGAGCCATGCCAGGGATACCATTACCTCATCTCAATTCATCAGAGACTCAGAGACAGTGACTTCAAATGATGGTGTCTTCAAACTTGGATTTTTCGGCCCTGCAAATTCAACAAACCGTTACGTAGGAATCTGGTATCTCTCTGACTCCAATGTCATATGGATAGCTAACAGAGACTCACCACTCAAAGATTTTTCTGGGGTTTTGAAGATCTCCAAAGATGGCAATCTTGTGATACTAGATAGCAAAAAAGAGGTAATTTGGTCGACAAATGTGTCAAACACTTCAATCAGTTCCACTGCTCAACTTTTACGTTCTGGAAATTTAGTACTGGTAGATGATGCAACTGGACAGTCCATATGGGAGAGTTTCAAACATCCTTGTGATGCAGCAGTGCCAACCATGAGAATCAGTGCTAACAGAGTAACTGGGGAGAAAACAAGGTTTATATCAAGGAAAAGTGATTCTGATCCTTCTACTGGTTACTTCTCTGCTAGTCTTGAACGTCTGGATGCACCAGAAGTGTTTCTGTGGATTAATGGAACTCGCCCATATTGGAGGACTGGTCCATGGAATGGTCGAATCTTTATTGGAACACCGCTGATGTCAACTGGGTATTTATATGGATGGAATGTGGGATATGAAGGGAGGGAAACTGTTTATCTAACTTACAGTTTTGCTGATCCATCTGCATTTGGAATCCTTTCCTTGAATCCACAAGGCAAACTTAAATTGGTTAGATTTTATAACAAAAAGCAATCGTTGAGTCTGGTGTTGGGAATTTCTGATTGTGATGTTTATGGCAAATGTGGGGCATTTGGAAGCTGTAACGTGCAGAGCTCACCAATCTGCAGCTGCTTGAGAGGATATGAACCAAGGAATCGAGAGGAGTGGAATAAGCAAAATTGGACTAGTGGGTGTGTGAGAAAGGAACCACTCAAGTGTGTGAGGTTGAAAAATGGAAGTGAAGCTGGCCAAGAAGATCAGTTTTTGAAACTTCAAATGATGAAAGTTCCTGACTTTGCAGAGAGGTTAGATGTTGAGGAAAGCCAGTGTGGAACCCAGTGTTTGCAGAATTGCTCTTGTTTAGCATATGCATATGATGCTGGCATTGGGTGCTTGTATTGGAGTGGAGACTTAATTGACTTACAACAATTCACAAGTGCTGGGGTTGATCTTCACATCCGTCTCGCCTATTCGGAATTTGCATCCAGTAATGCACTTAAGCATACTAATAAAAGAAGGCACAAGAGATTAATCATTGGAATTACAGTGGCAACTGGAACGATCATCTTTGCCATCTGTGCATATCTTGCCATTCGTACATATCATTCGCGGAAAGGAACTGCTAAACGTTCAGACATTCAGAGTCAAAGAATGACTGGGGTCCAAAAACAAGTTAAACTGGATGAGCTACCGCTATTTGATTTTGAAGTGGTCGCAACTGCTACAAACGACTTTCACGTAGCTAACACTCTTGGAAAGGGAGGGTTTGGTCCAGTGTATAAGGGATTATTGCCAGATGGTCAGGAAATTGCAGTGAAAAGGCTCTCCAGAACATCTGGACAAGGTTTAGAAGAATTCATGAATGAGGTGGTGGTGATTTCTAAGCTTCAACATCGCAATCTTGTGAGACTTCTTGGCTGCTGTATTGAAGGAGATGAAAAGATGCTGATCTATGAGTTCATGCCAAATAAGAGTTTGGATGCATTTATATTTGATCCACTCCAGCGGAAACTTCTTGACTGGACAAAATGTTTTAATATAATGGAAGGAATTGCTCGAGGCCTACTTTACCATCATAGAGATTCTAGATTAAGAATTATACATAGAGATCTGAAGGCAAGCAATATCTTGCTAGATGCAGAGATGAATCCAAAAATATCAGACTTTGGTTTGGCTAGAATACATAAAGGCGAAGATGAGGTTAATACCAAAAGGGTTGTTGGCACCTATGGTTATATGTCTCCTGAATATGCAATGGAAGGAATGTTTTCCGAGAAATCAGATGTCTACAGCTTTGGAGTTTTGTTATTGGAGATTGTTAGCGGAAAAAGAAACACTAGCTTTCGTAACGATGAGTCTCTCAGTCTCATAGGATTTGCGTGGAATCTATGGAACGAAGACAACATTAAATCTTTGATAGATCCGGAGTTATCAATTTCAGGTTCTGAGAATCATATTTTGAGGTGCATCCACATAGCATTTCTTTGTGTGCAAGAAGTTGCAAAATCAAGACCAACTATGACTACTGTGGTCCTGATGCTTAATAGTGAGATTTTCCATCTCCCTCCTCCTAGGCATGTTGGATTTGTGCAGAAGCAATATTCATCAAGTTTAGAGTCTTCATCTCAGGAAAATCAGCGCAACTCCAACAACAATGTAACCCTTACTGAGATGCAGGGCAGATAA 2478 0.406 MGFTSHTSLVNALLIFSIIFLGLSHARDTITSSQFIRDSETVTSNDGVFKLGFFGPANSTNRYVGIWYLSDSNVIWIANRDSPLKDFSGVLKISKDGNLVILDSKKEVIWSTNVSNTSISSTAQLLRSGNLVLVDDATGQSIWESFKHPCDAAVPTMRISANRVTGEKTRFISRKSDSDPSTGYFSASLERLDAPEVFLWINGTRPYWRTGPWNGRIFIGTPLMSTGYLYGWNVGYEGRETVYLTYSFADPSAFGILSLNPQGKLKLVRFYNKKQSLSLVLGISDCDVYGKCGAFGSCNVQSSPICSCLRGYEPRNREEWNKQNWTSGCVRKEPLKCVRLKNGSEAGQEDQFLKLQMMKVPDFAERLDVEESQCGTQCLQNCSCLAYAYDAGIGCLYWSGDLIDLQQFTSAGVDLHIRLAYSEFASSNALKHTNKRRHKRLIIGITVATGTIIFAICAYLAIRTYHSRKGTAKRSDIQSQRMTGVQKQVKLDELPLFDFEVVATATNDFHVANTLGKGGFGPVYKGLLPDGQEIAVKRLSRTSGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEKMLIYEFMPNKSLDAFIFDPLQRKLLDWTKCFNIMEGIARGLLYHHRDSRLRIIHRDLKASNILLDAEMNPKISDFGLARIHKGEDEVNTKRVVGTYGYMSPEYAMEGMFSEKSDVYSFGVLLLEIVSGKRNTSFRNDESLSLIGFAWNLWNEDNIKSLIDPELSISGSENHILRCIHIAFLCVQEVAKSRPTMTTVVLMLNSEIFHLPPPRHVGFVQKQYSSSLESSSQENQRNSNNNVTLTEMQGR* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00444 825 SMART blect_4 33 149 IPR001480 -
Rops11g00444 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Rops11g00444 825 Pfam S-locus glycoprotein domain 208 315 IPR000858 GO:0048544
Rops11g00444 825 ProSiteProfiles Protein kinase domain profile. 509 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00444 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 215 IPR036426 -
Rops11g00444 825 CDD STKc_IRAK 515 779 - -
Rops11g00444 825 SMART ntp_6 347 419 IPR003609 -
Rops11g00444 825 SMART serkin_6 509 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00444 825 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Rops11g00444 825 Pfam PAN-like domain 347 405 IPR003609 -
Rops11g00444 825 Gene3D Transferase(Phosphotransferase) domain 1 585 784 - -
Rops11g00444 825 PIRSF SRK 1 825 IPR024171 GO:0004674
Rops11g00444 825 Gene3D Phosphorylase Kinase; domain 1 468 584 - -
Rops11g00444 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 146 - -
Rops11g00444 825 Pfam D-mannose binding lectin 74 175 IPR001480 -
Rops11g00444 825 CDD B_lectin 33 149 IPR001480 -
Rops11g00444 825 Gene3D - 23 147 IPR036426 -
Rops11g00444 825 CDD PAN_AP_plant 334 420 - -
Rops11g00444 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 585 786 - -
Rops11g00444 825 MobiDBLite consensus disorder prediction 802 825 - -
Rops11g00444 825 FunFam receptor-like serine/threonine-protein kinase SD1-8 481 584 - -
Rops11g00444 825 SUPERFAMILY Protein kinase-like (PK-like) 494 807 IPR011009 -
Rops11g00444 825 ProSiteProfiles PAN/Apple domain profile. 337 420 IPR003609 -
Rops11g00444 825 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 769 - -
Rops11g00444 825 Pfam Protein tyrosine and serine/threonine kinase 510 776 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00444 Rops-Chr11 6016993 6021586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00444 380 825 Receptor kinase-like Gene Family AT4G21410 46.398 1.45e-123 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g00444 PK_Tyr_Ser-Thr 5.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00444 - - gmx:112998788 1372.45