Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00442 ATGAATTCAAAGTTCAGCAAGGTCATGGGATTCAGTGTCCCAGGAATCATGTTACCAGTTTTTCTCACTCTCTCAAGCTTTTACATAAATTTTGGCACTGCCTTAGACACCATTACAGCGTCTCAATCGATCAAAGATCCTGAAACTATAAGCTCAAAGGACGACGCATTCAAGCTAGGATTCTTCAGCCTCGCAAACACAACAAATCGCTACGTTGGAATCTGGTATCACTCTGATTCCAACATCATATGGGTGGCCAACAGAGAACAACCACTAAAGGATTCTTCTGGGGTTGTCACCATATCTAACAGCAGCAACCTTATCGTATTGAATGGAGAAAAACAAGTTGTTTGGTCATCAAATGTCTCAAGTATTGCATCCAATTCCACTGCCCAACTTCTAAATACTGGGAACCTTGTCTTGGTGGATGACACTACAGGCAAGACTATATGGGAGAGTTTCAAACATCCCTCTGATACATTCCTTCCAAATATGATAATTAGCGCCAACGAAAGAACAGGGGAGAGAGTAAAGGCTACTTCATGGAAAAGTCCTTCTGATCCAGCCATTGGAAACTTCTCTAGCAGCCTTGAGCGTCTCAGTGCTCCTGAATCGTTTGTTTGGAATCAAACACAACCATTCTGGCGCTCAGGTCCATGGAACGGTCAGGTATTTATTGGTTTGGCCAACAATTTGATGTATGATTTTGGATATCTAAATGGATTCAGTATTGGAAGGGAACAGAATGGAACTGTTCAGATAACTTATCCTCCACCAAATAATTCTTTCTTTGGAACCGTTCATGTGAGTTCAGAAGGCAAGCTGGTGTACACTGCCTGGATCAACAGGAATCTAATGAAGAAGGAGAAGGTGGTATTTCAGGAAAGTGACTGTGATATTTATGGCTTCTGTGGCTCTTATGGAAGCTGTGATTCCAAGAATTCGCCAATCTGCGCCTGTTTGAGAGGTTTTGAGCCGAGAAACGTGGATGAATGGGACAGACAAATATGGAAAAGTGGGTGTGTAAGAAGGGCAAAATTGCAGTGTGAGAGGGTGAAAAATGGGAGTGAAGCTGGCAAAGGAGATGGGTTTTTGAAATTGGAGATGTCAAAAGTACCAGACTTTGTGCAGCCATCATATCTTTCAGTTGACGCATGTAGAACTGAGTGCCTGAATAATTGTTCTTGTACAGCTTATGCATTTGATGCTAGCATTGGCTGTTTGACATGGAGTGGGAAATTAATTGACATAGTAAGGTTCTCAAGTGGAGGAGTTGATCTTTACATCCGCCAAGCTTATTCAGAACTTGATGGGAAGAGACATATCACAGCAACCATTATAGCTCCAGTGATAGTAGGAGCAAGTATTGTTGCTACCTGTACATATTTTTTATGGTCATGGACTTCTGAACGTTCAGCGAGAAGAAAGGAAATGAAAGGATCGTTGGTGTTGACCACAAGGGAAACCAATCCAGAAAACCGAAGTGCAGATGTAATTGGAGATGATAAAATCCAGGACCTTCCATTATTTGACTTTAGAAACGTTGCAACTGCAACAAATAACTTCGATCCAGCTAATAAGCTTGGCCAGGGTGGTTTTGGTTCGGTACATAAGGGAGAATTGCTAGATGGACAAGATGTAGCAGTAAAAAGACTTTCCAGAGCTTCGGGACAGGGGCTAGAAGAATTTATGAATGAAGTGCTTGTGATTTCAAAGCTTCAACACCGCAATCTTGTAAGACTTCTAGGCTGCTGCATCGAAGGGGAAGAAAAGATGTTAATCTATGAGTACATGCCTAACAACAGTTTAGATTTTTATCTATTTGACCCAATCAGAAAGAAGGTTTTAGATTGGCAAAAACGTTTAAACATAATTGAAGGAATATCTCGAGGTCTGCTTTATCTACATAGAGATTCGAGATTAAGAATAATACATAGAGATCTGAAGGCAAGTAATATATTGCTGGATGGAGAACTGAATCCAAAGATATCTGACTTTGGTATGGCCAGAATCTTTGGAGGCAGCGAAAATGAGGCCAATACTAGAAGGATTGTGGGAACATATGGGTACATGTCCCCTGAATATGCAATGGAAGGGCTGTTTTCAGAGAAATCGGACGTCTATAGCTTTGGAGTTTTGCTCCTGGAGATAATTAGTGGTTGGAAAAACACAAGTTTCTATAATCATGAGCAGTCGTTGAGCCTCTTAGGATATGCTTGGAAACTATGGAATGAAGAGGAGATTGTATCTCTGATAGATCCAGAAATATCTAAACCAGATTATGTCAATCACATTTTGAGATGTATACACATTGGACTTCTTTGTGTGCAAGAATTTGCAAAGGAGAGGCCTACTATGGCCACCGTGGTTTCAATGCTTAACAGTGAGATTGTTAATTTTCCTCCTCCAAAGCAACCCGCATTCATCCAAAGACAGACTGAGCAGAGAGGACAGAGTCATGAATCAAATTCCATCAACAATGTTACTATCACAAACATGCAAGGCAGATAG 2511 0.4098 MNSKFSKVMGFSVPGIMLPVFLTLSSFYINFGTALDTITASQSIKDPETISSKDDAFKLGFFSLANTTNRYVGIWYHSDSNIIWVANREQPLKDSSGVVTISNSSNLIVLNGEKQVVWSSNVSSIASNSTAQLLNTGNLVLVDDTTGKTIWESFKHPSDTFLPNMIISANERTGERVKATSWKSPSDPAIGNFSSSLERLSAPESFVWNQTQPFWRSGPWNGQVFIGLANNLMYDFGYLNGFSIGREQNGTVQITYPPPNNSFFGTVHVSSEGKLVYTAWINRNLMKKEKVVFQESDCDIYGFCGSYGSCDSKNSPICACLRGFEPRNVDEWDRQIWKSGCVRRAKLQCERVKNGSEAGKGDGFLKLEMSKVPDFVQPSYLSVDACRTECLNNCSCTAYAFDASIGCLTWSGKLIDIVRFSSGGVDLYIRQAYSELDGKRHITATIIAPVIVGASIVATCTYFLWSWTSERSARRKEMKGSLVLTTRETNPENRSADVIGDDKIQDLPLFDFRNVATATNNFDPANKLGQGGFGSVHKGELLDGQDVAVKRLSRASGQGLEEFMNEVLVISKLQHRNLVRLLGCCIEGEEKMLIYEYMPNNSLDFYLFDPIRKKVLDWQKRLNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDGELNPKISDFGMARIFGGSENEANTRRIVGTYGYMSPEYAMEGLFSEKSDVYSFGVLLLEIISGWKNTSFYNHEQSLSLLGYAWKLWNEEEIVSLIDPEISKPDYVNHILRCIHIGLLCVQEFAKERPTMATVVSMLNSEIVNFPPPKQPAFIQRQTEQRGQSHESNSINNVTITNMQGR* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00442 836 PIRSF SRK 8 836 IPR024171 GO:0004674
Rops11g00442 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 188 IPR036426 -
Rops11g00442 836 SMART blect_4 41 157 IPR001480 -
Rops11g00442 836 Gene3D - 31 155 IPR036426 -
Rops11g00442 836 SUPERFAMILY Protein kinase-like (PK-like) 505 826 IPR011009 -
Rops11g00442 836 ProSiteProfiles Protein kinase domain profile. 522 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00442 836 Gene3D Transferase(Phosphotransferase) domain 1 598 800 - -
Rops11g00442 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Rops11g00442 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 801 - -
Rops11g00442 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 31 154 - -
Rops11g00442 836 Pfam PAN-like domain 359 417 IPR003609 -
Rops11g00442 836 Pfam S-locus glycoprotein domain 215 327 IPR000858 GO:0048544
Rops11g00442 836 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Rops11g00442 836 CDD B_lectin 41 157 IPR001480 -
Rops11g00442 836 ProSiteProfiles Bulb-type lectin domain profile. 35 154 IPR001480 -
Rops11g00442 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 486 597 - -
Rops11g00442 836 SMART ntp_6 359 431 IPR003609 -
Rops11g00442 836 Gene3D Phosphorylase Kinase; domain 1 498 597 - -
Rops11g00442 836 CDD PAN_AP_plant 346 430 - -
Rops11g00442 836 Pfam Protein tyrosine and serine/threonine kinase 526 793 IPR001245 GO:0004672|GO:0006468
Rops11g00442 836 ProSiteProfiles PAN/Apple domain profile. 349 432 IPR003609 -
Rops11g00442 836 SMART serkin_6 522 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00442 836 MobiDBLite consensus disorder prediction 811 836 - -
Rops11g00442 836 Pfam D-mannose binding lectin 82 183 IPR001480 -
Rops11g00442 836 CDD STKc_IRAK 528 794 - -
Rops11g00442 836 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 25 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00442 Rops-Chr11 5997981 6003947 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00442 483 811 Receptor kinase-like Gene Family AT4G05200 56.495 1.10e-127 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g00442 PK_Tyr_Ser-Thr 6.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00442 - - gmx:112998788 1249.57