Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00441 ATGACAATTCAGAGCAAAAGCCAGGTAATTAACCAGGGCAAAGTTAAACTCCCGGAGCTTTCCCAGTTTGAGTTTGAAAAGCTTGCTGTTGCAACAAACAATTTTCACTTAAATAATAAGCTAGGACAAGGTGGTTTTGGACCAGTATATAAGGGTACATTGGAAGATGGACAGGAAATAGCAGTTAAAAGACTTTCAAGGACTTCTGGACAAGGTCTAGAAGAATTTATGAATGAGGTTGTGGTAATATCGAAGCTTCAACATCGTAGCCTTGTCAGACTTCTTGGATGTTGTATCGAAGGAGATGAAAAGATTTTGATCTATGAGTACATGCCAAACAGAAGTTTGGATGCATATATGTTTGATCCATGTGAACAGGTACTAGATTGGGAAAACCGTTTTAATATACTTGAAGGAATTGCTCGGGGTCTACTTTACCTTCATAGAGACTCTCGACTAAGGATTATCCATAGAGACCTGAAGTTAAGTAATATATTGCTGGATGAAGAGCTAAATCCAAAAATATCAGATTTTGGTTTGGCAAAGATTTTTGGTTGCAGTGAACACGAGGCCAATACTGGAAGGGTTGTTGGAACCTATGGTTATATGTCTCCAGAATATGCTATGGAAGGGCTGTTTTCAGAGAAGTCTGATGTCTTTAGCTTTGGTGTTGTATTGCTGGAAATTGTTAGCAGGAGAAAAAATACCAGTTTTTATGATGATGCTGAATCTTTGAGCCTTTTAGGATTTGCATGGAAATTGTGGAATGATGACAACGTTACTTCTCTAATAGATCCAGAAATATCAAATCCAAGCTTCCATGCAGATATTATTAGATGCATACATATCGGTCTTCTTTGTGTACAAGAACTTGCAAGAGACAGGCCTACAATGACTACAGTAATTTCAATGCTGAGTAATGAGACTGTATATCTTCCTCCCCCAAGGCAACCGGCATTTTATCAAAGGCAGACAATGTTGGATGTAGAGTACTCTCGTAAAAATGAGGAATTATGCTCCATCAATTATGTGAGTGTAACAGATACTCAAGGAAGATAG 1059 0.3805 MTIQSKSQVINQGKVKLPELSQFEFEKLAVATNNFHLNNKLGQGGFGPVYKGTLEDGQEIAVKRLSRTSGQGLEEFMNEVVVISKLQHRSLVRLLGCCIEGDEKILIYEYMPNRSLDAYMFDPCEQVLDWENRFNILEGIARGLLYLHRDSRLRIIHRDLKLSNILLDEELNPKISDFGLAKIFGCSEHEANTGRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVVLLEIVSRRKNTSFYDDAESLSLLGFAWKLWNDDNVTSLIDPEISNPSFHADIIRCIHIGLLCVQELARDRPTMTTVISMLSNETVYLPPPRQPAFYQRQTMLDVEYSRKNEELCSINYVSVTDTQGR* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00441 352 SMART serkin_6 35 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00441 352 Pfam Protein tyrosine and serine/threonine kinase 36 304 IPR001245 GO:0004672|GO:0006468
Rops11g00441 352 ProSiteProfiles Protein kinase domain profile. 35 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00441 352 Gene3D Transferase(Phosphotransferase) domain 1 111 311 - -
Rops11g00441 352 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 110 - -
Rops11g00441 352 CDD STKc_IRAK 41 305 - -
Rops11g00441 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Rops11g00441 352 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 328 - -
Rops11g00441 352 SUPERFAMILY Protein kinase-like (PK-like) 19 305 IPR011009 -
Rops11g00441 352 Gene3D Phosphorylase Kinase; domain 1 1 110 - -
Rops11g00441 352 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 111 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00441 Rops-Chr11 5995879 5997406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00441 22 352 Receptor kinase-like Gene Family AT4G23140 54.227 1.48e-128 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g00441 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00441 - - adu:107468469 569.311