Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00438 ATGGGGTTCAGTCAGTTTGAGTTTAGATACTTACCTGTTTTGCTAGTACTTTGCTGTTTGTCCATTCATGATGGCACTTCCCTAGACACCATCACATCATCCCATTTCCTCAAGTACCCTGAAACTTTAAGCTCCAGTGACGGTTTCTTCCAGCTTGGATTCTTCACCCCTCAAAACTCAACCTTCTCCTACCTGGGAATTTGGTATATGTCTAGACCCCCTGTCATATGGGTAGCTAATAGAGACAAACAACTGAATGATTCTTCTGGGATAGTCAAAATATCCGAGGATGGAAATCTTGTTCTTATGAATGGACAGCAACAGATTCTTTGGTCAACAAATGTGTCCCATATTGCATCTAACACAACAACGGCTTTGCTTCTGAATACTGGCAATCTTGTGTTGCAAGAAAGCACAACAGGAAGAATGTTATGGCAGAGTTTTGAACACCCATGTAATTCATTATTGCAGAAAATGAAACTTTATTCGAATGACACTAGAATGAAAATCACCTCATGGAAAAGTCCTCAGGATCCATCTATTGGAAACTTCACTCTGAGTCTCGAACGCCTAAACATCCCTGAAATTTTCACCTGGAGAGGAAGTCAACCATACTGGAGAAGTGGTCCATGGAATGGTCAAATCTTTCTTGGAATACCTGGTATGAACTCCAACTATCTTGATGGATTTTACTTAGGTGGACAAGATGAAGGGGACGACAATTACTATCTCACTTATACATATGCAAATCAGTCTCAGTTGAGAATGTATGTGTTGACTACTCAAGGTACTGTAGCTGAATTGTTTTGGGATTATGCTCAGAGATTATGGTTTATCACGTGGTCAGTTCCAAATTCTGATTGTGATGTTTATGGCATATGTGGGGTATTTGGAAGCTGCGATCCTAGAAGTTCACCTATCTGCAGCTGTTTGAAAGGATTTGAGCCAAGGAATCCGGAGGAATGGAATAGGCAAAACTGGACCAGTGGATGTGTCAGGACGGAACCTTTTCAGTGTGAGAGAATGAAAAATGGGAGTGAAGCTGGCCATAGTGATGGGTTTCTGAAGCTGCAGAATACCAAAGTTCCAGACTTCATCCAGTGGTCTTCTTCTCTTTATGATGATTGTAGGACTCAGTGCTTGCAAAACTGCTCTTGTTTGGCATATGCCTATGATGTTGGCGTTGGCTGTATGTTATGGAGTGCAGACTTAGTTGACATGCAGAGGTTCTCAGCTGGAGGAACTGATCTTTACCTTCGGGTTCCCTATTCACAACTTGATCGAAATAAGAATAACACCACAGTGATCATCGCAGTTATAGTCACAATAGGAACAATTCTCATTGTGACATGTGGATATGTCTTGTGGAAAAGGGCTACAAAAGGAGAGAAAAGAAATCTGACAATTCAGAGCAAGAGCCAGGTAAATGTCCTGAGCGAAGTTAAACTCCCGGAGCTTTCCCAATTTGAGTTTGAAAAGCTTGCTGCTGCAACAAACAACTTTCACTTAGCTAATAAGCTAGGACAAGGTGGTTTTGGACCAGTATACAAGGGTAAATTGGAAGATGGACAGGACATAGCAGTTAAAAGACTTTCAAGGACTTCTGGACAAGGTCTTGAAGAATTTATGAATGAGGTTGTAGTAATATCAAAACTTCAACATCGCAACCTTGTCAGACTTCTTGGATGTTGTATCGAAGGAGATGAAAAGATTTTGATCTATGAGTACATGCCAAACAGAAGTTTGGATGCATATATGTTTGATCCATGTGAACAGGTACTAGATTGGGAAAAACGTTTTAATATACTTGAAGGAATTGCTCGGGGTCTACTTTACCTTCATAGAGACTCTCGACTAAGGATTATCCATAGAGACCTGAAGTTAAGTAATATATTGCTGGATGAAGATTTGAATCCAAAAATATCAGACTTTGGTATGGCAAAGATTTTTGGTGGCAGTGAACATGAAGGCAATACTCGCAGGGTTGTTGGAACCTATGGTTATATGTCTCCAGAATATGCCATGGAAGGACTATTTTCAGAGAAGTCTGATGTCTTTAGCTTTGGGGTTGTACTTCTGGAGATTGTCAGCAGGAGAAAGAATACCAGTTTTTATCAGGATGCTGAATCTTTGAGCCTTTTAGGACTTGCATGGAAATTGTGGAATGATGACAACATTACTTCTCTAATAGATCCAGAAATATCAAATCCAAGCTTCCATGCAGATATTATTAGATGCATACATATTGGTCTTCTGTGTGTGCAAGAACTTGCAAGAGACAGGCCTACAATGACTACAGTAATTTCAATGCTGAGTAATGAGACTGTATATCTTCCTCCCCCAAGGCAACCAGCATTTATTCAAAGGCAGACCATGTTGGATGTAGAGTGCTCTCGTGAAAATGAGGAATTATGCTCCATCAATTATGTGAGTGTAACAGATACACAAGGAAGATAG 2457 0.4033 MGFSQFEFRYLPVLLVLCCLSIHDGTSLDTITSSHFLKYPETLSSSDGFFQLGFFTPQNSTFSYLGIWYMSRPPVIWVANRDKQLNDSSGIVKISEDGNLVLMNGQQQILWSTNVSHIASNTTTALLLNTGNLVLQESTTGRMLWQSFEHPCNSLLQKMKLYSNDTRMKITSWKSPQDPSIGNFTLSLERLNIPEIFTWRGSQPYWRSGPWNGQIFLGIPGMNSNYLDGFYLGGQDEGDDNYYLTYTYANQSQLRMYVLTTQGTVAELFWDYAQRLWFITWSVPNSDCDVYGICGVFGSCDPRSSPICSCLKGFEPRNPEEWNRQNWTSGCVRTEPFQCERMKNGSEAGHSDGFLKLQNTKVPDFIQWSSSLYDDCRTQCLQNCSCLAYAYDVGVGCMLWSADLVDMQRFSAGGTDLYLRVPYSQLDRNKNNTTVIIAVIVTIGTILIVTCGYVLWKRATKGEKRNLTIQSKSQVNVLSEVKLPELSQFEFEKLAAATNNFHLANKLGQGGFGPVYKGKLEDGQDIAVKRLSRTSGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEKILIYEYMPNRSLDAYMFDPCEQVLDWEKRFNILEGIARGLLYLHRDSRLRIIHRDLKLSNILLDEDLNPKISDFGMAKIFGGSEHEGNTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVVLLEIVSRRKNTSFYQDAESLSLLGLAWKLWNDDNITSLIDPEISNPSFHADIIRCIHIGLLCVQELARDRPTMTTVISMLSNETVYLPPPRQPAFIQRQTMLDVECSRENEELCSINYVSVTDTQGR* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00438 818 CDD STKc_IRAK 507 771 - -
Rops11g00438 818 ProSiteProfiles Protein kinase domain profile. 501 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00438 818 Pfam Protein tyrosine and serine/threonine kinase 502 770 IPR001245 GO:0004672|GO:0006468
Rops11g00438 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 576 - -
Rops11g00438 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Rops11g00438 818 Pfam D-mannose binding lectin 75 174 IPR001480 -
Rops11g00438 818 CDD PAN_AP_plant 344 422 - -
Rops11g00438 818 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Rops11g00438 818 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Rops11g00438 818 SUPERFAMILY Protein kinase-like (PK-like) 484 771 IPR011009 -
Rops11g00438 818 Gene3D - 25 149 IPR036426 -
Rops11g00438 818 Pfam S-locus glycoprotein domain 206 317 IPR000858 GO:0048544
Rops11g00438 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 761 - -
Rops11g00438 818 PIRSF SRK 4 818 IPR024171 GO:0004674
Rops11g00438 818 Gene3D Phosphorylase Kinase; domain 1 459 576 - -
Rops11g00438 818 CDD B_lectin 41 151 IPR001480 -
Rops11g00438 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 779 - -
Rops11g00438 818 SMART ntp_6 349 421 IPR003609 -
Rops11g00438 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 213 IPR036426 -
Rops11g00438 818 SMART serkin_6 501 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00438 818 Pfam PAN-like domain 350 407 IPR003609 -
Rops11g00438 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 148 - -
Rops11g00438 818 Gene3D Transferase(Phosphotransferase) domain 1 577 777 - -
Rops11g00438 818 SMART blect_4 34 151 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00438 Rops-Chr11 5970564 5973832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00438 473 786 Receptor kinase-like Gene Family AT4G11530 57.278 1.60e-123 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g00438 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00438 - - adu:107468469 1122.07