Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00437 ATGATGATGATGACAAAATACCAACGCATAGTTTCGAGTTTTTTCTTCTCTTTTCTTTATTTCTGTGCCGTTTTCTCACTTGCTGCCAGTTCCAGGATCAGACAGGGTGATGTGATCAGAGACATAGACGGTGAAACTTTGGTATCAGATGGACTCAACTTCGCAATGGGTTTCTTCATTATGGATAACTCCTCTTCTCGTTATGTTGGGATTTGGTACTACAACATTCCCGGACCTACAGTCATATGGGTTGCACACAGGGACAAACCCATCAAAGACAAAGGAGGTGCTATCACTATAGGAAGTGATGGTAATCTAGTTATCCTAGACGGAGAGAAGAATCAAGTCAGGTGCAGTAGTGCTTCCCTTCCCAACAACAACTCCGAAGTGATGCTTCGTGATGATGGTAATCTTGTTCTTTCAACCCAAAAGGACGAGAAAGAGGTGTGGAAAAGCTTTAAGAACCCAACTGATACATATGTGCCTGGCATGAAAGCGCCACTGAGAGCAGCAGGGGGGGAGGGGGAGGGCTTTGCCTTCACGTCGTGGAAATCAGCTATGGATCCTTCACCTGGAAACTACACCATGTGGGCTGATTCTGACGGGTTACCCCAGATAGTGGTTCGTGAGGGAGACAACAGGAGGTGGAGAAGTGGCTACTGGGATGGTACAATATTTAGGGGCGTGGATATGACAGGACCTTCCACTCGCTCTGGCTTTAAACTTTTCACTGATGAAGAAGGAGAAAGGTACTTTGAATATAACCCGTTGAACGAAGCTGATAAGGTAAGGTTTCAGATAGGATGGGATGGTTACGAAAGGGAGTTGTATTGGAATGAAGGTGAGAAACAATGGACTGAGATACAGAGAGGGCCTTTCACTGAGTGTGAGGTTTATAACACGTGTGGTAGTTTTGCAGTATGTGATTTCTCCGTTTCAGGTTCAGCTATTTGTAGTTGCATACAAAGGTTTGAACCGAAGCATAGGGATCAGTGGGATAAGGGGAACTGGTCAGGTGGGTGTGTGAGGATGACCCCACTCAAGGATGAGAGAAATGCCAGTTCCGGAACTCAGGTGAATGTTGAAGAAGATGGTTTTTTGGAACTTAGGAGTATGAAGTTGCCGGATTTCGCACGTATGGTTGACACACAGGATTGTGAGAACAATTGTTTGAAGAATACTTCTTGTACTGCATATGCAGATGTTCTTGGAATTGGGTGCATGATTTGGGATAGGGAGTTGCTTGATGTTCTACACTTGGAAGATGGAGGAAATACACTGCACATCCGCCTCTCAGGTTCTGATTTAGTTTCCTCAGCTTCATGTTGCAAGAGTAGTGGTGTACTACCAATCTTTGATGCAAGCAAGAGCATAAACATGTTAGCAGAAATTTTAGGATCAACTGACCTAAGTTTGAAAGAGAAGCAACTAAGCGGACTAAAACTTCCATTTTTCAATTTTAGTTGCATTTCAATAGCCACAGACAACTTTTCAGAAGAAAATAAGCTTGGGCAAGGAGGCTTCGGTCCTGTCTACAAGGGAAAGCTTCCAAGCGGAGAACAAATAGCTGTGAAGAGGCTTTCAAGACTGTCTTGCCAAGATCCAGTCAAGCAGACACAATTAGACTGGACAAGACGCTTTGAAATCATTGAAGGCATTGCAAGAGGAATGCTTTATCTGCATCGGGATTCAAGACTCAGAATAATTCACCGAGATCTAAAAGCAAGCAACATTTTGTTAGATGAAAACATGAACCCAAAAATATCAGACTTTGGCTTGGCCCGGATATTTGGTGGAAACCAGAATGAAGCCAATACAATAAGAGTGGTCGGTACATTCGGTTATATATCCCCGGAATATGCAATGAAAGGTCTGTTTTCAATAAAATCAGATGTATATAGTTTTGGTGTATTACTACTAGAGATTGTGAGTGGCCGCAGGAACAGTAGCTTTCGCCACTCAGATGATTTAAGTCTCATAAGATATGCGTGGCGTCTTTGGAATGAATACAGAGCATTGGAGCTTGTTGATCCTTGCATTTGTGAGTCTAGTCCTGAAAACAAAGCTTTGAGATGCATACACATAGGGATGTTATGTGTACAAGACTCAGCAGCTGACAGACCAAACACGTCCGATGTGGTGTTGATGCTGGAAAGTGAAGCAACAACTCTTCCCTTGCCTACTAAATCTCAGATTACTTCCATGAGGAGGTCTGAGGATAGAGAATTTAACATGGATGGCCTTGATGTTTCAAATGATCTCACAGTCACAATGGTGGTAGGCAGATAG 2289 0.4329 MMMMTKYQRIVSSFFFSFLYFCAVFSLAASSRIRQGDVIRDIDGETLVSDGLNFAMGFFIMDNSSSRYVGIWYYNIPGPTVIWVAHRDKPIKDKGGAITIGSDGNLVILDGEKNQVRCSSASLPNNNSEVMLRDDGNLVLSTQKDEKEVWKSFKNPTDTYVPGMKAPLRAAGGEGEGFAFTSWKSAMDPSPGNYTMWADSDGLPQIVVREGDNRRWRSGYWDGTIFRGVDMTGPSTRSGFKLFTDEEGERYFEYNPLNEADKVRFQIGWDGYERELYWNEGEKQWTEIQRGPFTECEVYNTCGSFAVCDFSVSGSAICSCIQRFEPKHRDQWDKGNWSGGCVRMTPLKDERNASSGTQVNVEEDGFLELRSMKLPDFARMVDTQDCENNCLKNTSCTAYADVLGIGCMIWDRELLDVLHLEDGGNTLHIRLSGSDLVSSASCCKSSGVLPIFDASKSINMLAEILGSTDLSLKEKQLSGLKLPFFNFSCISIATDNFSEENKLGQGGFGPVYKGKLPSGEQIAVKRLSRLSCQDPVKQTQLDWTRRFEIIEGIARGMLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEANTIRVVGTFGYISPEYAMKGLFSIKSDVYSFGVLLLEIVSGRRNSSFRHSDDLSLIRYAWRLWNEYRALELVDPCICESSPENKALRCIHIGMLCVQDSAADRPNTSDVVLMLESEATTLPLPTKSQITSMRRSEDREFNMDGLDVSNDLTVTMVVGR* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00437 762 CDD PAN_AP_plant 360 432 - -
Rops11g00437 762 CDD B_lectin 43 156 IPR001480 -
Rops11g00437 762 SMART blect_4 38 156 IPR001480 -
Rops11g00437 762 Pfam D-mannose binding lectin 80 184 IPR001480 -
Rops11g00437 762 PIRSF SRK 1 535 IPR024171 GO:0004674
Rops11g00437 762 PIRSF SRK 531 762 IPR024171 GO:0004674
Rops11g00437 762 Gene3D Transferase(Phosphotransferase) domain 1 534 734 - -
Rops11g00437 762 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 708 - -
Rops11g00437 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 568 580 IPR008271 GO:0004672|GO:0006468
Rops11g00437 762 Gene3D Transferase(Phosphotransferase) domain 1 483 533 - -
Rops11g00437 762 ProSiteProfiles PAN/Apple domain profile. 361 433 IPR003609 -
Rops11g00437 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 153 - -
Rops11g00437 762 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 221 IPR036426 -
Rops11g00437 762 Gene3D - 25 154 IPR036426 -
Rops11g00437 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 525 725 - -
Rops11g00437 762 SMART serkin_6 497 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00437 762 Pfam S-locus glycoprotein domain 216 327 IPR000858 GO:0048544
Rops11g00437 762 ProSiteProfiles Protein kinase domain profile. 415 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00437 762 ProSiteProfiles Bulb-type lectin domain profile. 30 153 IPR001480 -
Rops11g00437 762 Pfam Protein tyrosine and serine/threonine kinase 538 714 IPR001245 GO:0004672|GO:0006468
Rops11g00437 762 SUPERFAMILY Protein kinase-like (PK-like) 483 738 IPR011009 -
Rops11g00437 762 SMART ntp_6 361 431 IPR003609 -
Rops11g00437 762 Pfam PAN-like domain 362 417 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00437 Rops-Chr11 5956091 5964096 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00437 444 756 Receptor kinase-like Gene Family AT4G23280 51.429 7.14e-97 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g00437 PK_Tyr_Ser-Thr 6.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00437 - - gmx:106794169 1043.88