Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00435 ATGACGGCAACATACCAACGCATAGTTTTTGTGTTTCTCTTCGCTTTCCTCTGTTTCTGTGGTGTGTTCTCACGTGCGGCCAGTTCCAGGATCAGGATCAGACAGGGTGATGTGATCAGAGACAAAGAGGGTGAAACTTTGGTTTCAGATGGCTTAAACTTCGTGATGGGTTTCTTCTCTGGTGATAACTCTTCTCGTTATGTTGGGATTTGGTACTACAACACTCCTGGACCAGTAGTTATATGGGTTGCAAACAGGGACAAACCCATCAAAGACAAAGGAGGTGCTATCACTATAGGAAGTGATGGCAATCTGGTTATCCTCGATGGAGAGAAGAACCAAGTCTGGTCCAGTAATGTTTCTGTTCCCAACATCAACAACAACTCTGAAGCCGTGCTTCGTGATGATGGCAATCTTGTTCTTTCAAGCCGAGGGAAAGAGGTGTGGCAAAGCTTTGAGAACCCAACTGATACATATCTACCTGGTATGAAAGTGCCGGTGAGAGCTTCAGAAGGGAAGAGCTTTGTCTTCACGTCATGGAAATCAGCTACGGATCCTTCACCTGGAAACTTCACCATGGGGGTTGATCCTGAGGGGTTACCCCAGATAGTGGTTTGGGAAGGAGAGAATAGGAGGTGGAGAAGTGGCTACTGGGATCGAAGAATGTTCACGGGGGTGAATATGTCAACCTTACTCTCTGGCTTTACACTTAACAGGGATGGTGATGGAAGCTACTTCGTGTATAGCCCCCTGAACAAAACTGACAAGGTAAGGTTTCAGATAGGATGGGATGGTTATGAAAGGGAGTTCTTTTGGAATAAAGGTGAGAAACATTGGAGTGAGAGACAGAAAGGGCCTTTTAATGAGTGTGAGGTTTATAACAAATGTGGCAGTTATGCAACATGTGATTTGTCCACTTCAGGTTCAGCCGTTTGTAGTTGCATATTAAAAGGGTTTGAACCAAACCATAGGGATGAATGGAATAAGGGGAACTGGAAAGGTGGGTGTAAGAGGATGACCCCACTCAAGGCTGAGAGAAATGACAGTTCTGGATCTCAGGTTAATGTTGGAGAAGATGGTTTCTTGGAACGTAGGAGTATGAAGTTACCGGACTTCGCAAGTGTGGTTAGCCCAACGGATTGTAAGAGCAGTTGTTTGAAGAATGCTTCTTGTACTGCATATGCTAATGTTCTTGGAATTGGGTGCATTGTTTGGTATGGGGAGTTGGTTGATGTTCAACACTTTGAACATGTAGGAAATACACTGTACATCCGCCTCGCTTATTCTGATTTAGGTGATAGAGGAAAAAAGAACAAGTTTGTGATAATATCAACTGTTGTGGCGGGGTTAATCTGCCTAGGAATCTTTGTATGGGTGGTATGGAGGTTCAAGGGAAAACTCAAAGTTTCCTCAGCTTCATGTTGCAAGAATAGCGATGTACTACCAGTCTTTGATGCAAGCAAGAGCAGAGACATGTCAGCAGAATTTTCAGGATCAGCTGACCTAAGTTTTGAAGCAAGTCCACTAAGCGGACCAGAACTTCCATTTTTCAATTTTAGTTGCATTTCAATAGCCACGAACAATTTTTCAGAAGAAAATAAGCTTGGGCAAGGAGGCTTCGGTCCTGTCTACAAGGGAAAGCTTCCAAGTGGAGAACAAATAGCTGTCAAAAGGCTTTCAAGATACTCTGGCCAAGGTTTAGAGGAGTTCAAGAATGAAATGATGCTGATAGCCAAACTACAACATAGAAATCTGGTTAGATTAATGGGTTGTTCTATTCAGGGGGAAGAAAAGTTGTTGGTATATGAATTCATGCCAAACAAAAGCTTGGATTGTTTTTTATTTGATCCAGTCAAGCAAACACAATTAGACTGGACAAAACGGTTTGAAATCATTGAAGGCATTGCAAGAGGATTACTTTATCTGCATCGGGATTCAAGACTCAGAATAATTCATCGAGATCTAAAAGCAAGCAACATTTTGTTAGATGAAAACATGAATCCAAAGATATCAGACTTTGGCTTGGCCCGGATATTTGGTGGAAACCAGAATGAAGCCAATACAACCAGAGTGGTTGGTACATATGGTTATATGTCCCCCGAATATGCAATGGAAGGTCTGTTTTCAGTAAAATCAGATGTATATAGTTTTGGTGTATTATTACTAGAGATTATCAGTGGTCGTAGAAACACTAGCTTTCGTCACTCAGATGACTCAAGTCTCATAGGATATGCATGGCATCTTTGGAATGAAAGGAGAGCAATGGAGCTTGTTGATCCTTGCATTCGAGAGTCTAGCCCTAAAAACAAAGCATTGAGATGCATACACATAGGGATGTTATGTGTGCAAGATTCAGCAGCTCATAGACCAAACATGTCTACTGTGGTGTTGATGCTTGAAAGTGAAGCAACAACTCTTCCATTGCCTAAGCAACCTTTGATTACTTCCATGAGGAGAACTGAGGACAGAGAATTTTACATGGATGGTCTTGATGTTTCAAATGATCTCACAGTCACCATGGTGGTAGGCAGATAG 2535 0.4233 MTATYQRIVFVFLFAFLCFCGVFSRAASSRIRIRQGDVIRDKEGETLVSDGLNFVMGFFSGDNSSRYVGIWYYNTPGPVVIWVANRDKPIKDKGGAITIGSDGNLVILDGEKNQVWSSNVSVPNINNNSEAVLRDDGNLVLSSRGKEVWQSFENPTDTYLPGMKVPVRASEGKSFVFTSWKSATDPSPGNFTMGVDPEGLPQIVVWEGENRRWRSGYWDRRMFTGVNMSTLLSGFTLNRDGDGSYFVYSPLNKTDKVRFQIGWDGYEREFFWNKGEKHWSERQKGPFNECEVYNKCGSYATCDLSTSGSAVCSCILKGFEPNHRDEWNKGNWKGGCKRMTPLKAERNDSSGSQVNVGEDGFLERRSMKLPDFASVVSPTDCKSSCLKNASCTAYANVLGIGCIVWYGELVDVQHFEHVGNTLYIRLAYSDLGDRGKKNKFVIISTVVAGLICLGIFVWVVWRFKGKLKVSSASCCKNSDVLPVFDASKSRDMSAEFSGSADLSFEASPLSGPELPFFNFSCISIATNNFSEENKLGQGGFGPVYKGKLPSGEQIAVKRLSRYSGQGLEEFKNEMMLIAKLQHRNLVRLMGCSIQGEEKLLVYEFMPNKSLDCFLFDPVKQTQLDWTKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEANTTRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIISGRRNTSFRHSDDSSLIGYAWHLWNERRAMELVDPCIRESSPKNKALRCIHIGMLCVQDSAAHRPNMSTVVLMLESEATTLPLPKQPLITSMRRTEDREFYMDGLDVSNDLTVTMVVGR* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00435 844 SMART blect_4 38 155 IPR001480 -
Rops11g00435 844 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Rops11g00435 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Rops11g00435 844 Pfam D-mannose binding lectin 80 181 IPR001480 -
Rops11g00435 844 Pfam Protein tyrosine and serine/threonine kinase 532 797 IPR001245 GO:0004672|GO:0006468
Rops11g00435 844 Gene3D Phosphorylase Kinase; domain 1 499 604 - -
Rops11g00435 844 Gene3D Transferase(Phosphotransferase) domain 1 605 807 - -
Rops11g00435 844 SMART ntp_6 356 426 IPR003609 -
Rops11g00435 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 605 807 - -
Rops11g00435 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 219 IPR036426 -
Rops11g00435 844 CDD B_lectin 44 155 IPR001480 -
Rops11g00435 844 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 790 - -
Rops11g00435 844 ProSiteProfiles Bulb-type lectin domain profile. 32 154 IPR001480 -
Rops11g00435 844 CDD PAN_AP_plant 355 427 - -
Rops11g00435 844 SMART serkin_6 529 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00435 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 494 604 - -
Rops11g00435 844 ProSiteProfiles Protein kinase domain profile. 529 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00435 844 PIRSF SRK 1 844 IPR024171 GO:0004674
Rops11g00435 844 SUPERFAMILY Protein kinase-like (PK-like) 514 826 IPR011009 -
Rops11g00435 844 ProSiteProfiles PAN/Apple domain profile. 356 427 IPR003609 -
Rops11g00435 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 152 - -
Rops11g00435 844 Pfam PAN-like domain 357 412 IPR003609 -
Rops11g00435 844 CDD STKc_IRAK 535 800 - -
Rops11g00435 844 Gene3D - 28 152 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00435 Rops-Chr11 5897897 5901740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00435 517 812 Receptor kinase-like Gene Family AT4G23140 62.706 7.16e-134 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g00435 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00435 - - gmx:102660295 1342.79