Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00434 ATGCGAGGTTTCATCAAACTCCTCCTTTTCTTCCTCTTTTGGTTCATCACTTCACTCACTTTTTTCACCACAATCTCATTATCTGCAGATACCTTAACCGCATCACAAATCCTCAGAACCAACCAGACCCTGGAATCAGCCAACAAAACTTTCGTTCTGGGTTTCTTTCCTAGCAGCAATTCCAACTCTTATTTAGGCATATGGTACAAGAACATGAAGGATAGAACAGTGGTTTGGGTGGCAAACAGAGACAACCCACTTGATAACTCCACAGGATTTCTCAAAATTGGAAACAAAGGAAACATAGTTCTTGCCAACTCATCAGAGAACTCTGTGTGGTCTTCAAATCAAACCACAGCTACCAACCCAGTTGTTCAGCTTTTGGATACTGGGAATTTAGTTCTGAGAGAAGCAAATGGAAGTGACCCCACAAAATATCTATGGCAAAGCTTTGATTACCCAGCAGATACGTTGTTACCAGGCATGAAAATGGGTTGGAACTTGGACACAGGCACAGAGAAGCACTTAACTTCATGGAGGAACACAGGGCAAGACCCTTCAACTGGAGATTATTCATTCAAGGTAGATTATCATGGACTACCAGAAATGTTCCTGTGGAGCAACAACCAGAACCGAATAATATATAAAAGTGGGCCTTGGAATGGTGAGAGATTCAGTGGGGTTCCAGAGATGGAACCAGTTACAGATTCTATTATGTTTAATTTTACTTATGATGCACATGGGGTATATTATTCATTCTTCATTGGGAACCAAACCATTTTTTCAAGGCTTATGGTGACATCTGGTGGTGAACTTCAACGCCTTACATGGGTACCAAGCAGCCAGACTTGGACAAAGTTTTGGTATGCACCTAAAGATCAGTGTGATGACTACAGAGAGTGTGGTCCATATGGTATCTGTGACACTAATGCTTCACCAGTTTGCAAGTGTGTGGGAGGGTTCAAGCCTAAGAATCAGCAGGCATGGAATTTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACAAATTTGGATTGTGGGAGTGACAAGTTTTTGCATATGCAGAACGTGAAGTTGCCTGAGACAACCAAGGTGTTTGTGAACAGGAGCATGAACCTTTTGGAATGTAAAGATTTGTGCCACAGGAATTGTTCTTGCACTGCTTATGCTAACATTGAGATCACCAATGGAGGAACTGGTTGTGTGTTTTGGATTGGTGAACTCATTGATATGAGGCAGTATTCTAATGATGGTCAAGATCTCTATGTCAGATTAGCAGCTTCTGAAGTAGATGACTCAGGAGCTGCAGTTGGCTCTCACAAGACAAATCATAAAGCTGAGGCTGTAGGAATTACAATTGCTGTAGCTGTTATAATTTTGGGATTGGGTATCTGTTTATGTAAGAAGAGGAAATTGCTAAGTATATTGAATGGGAAAACAGACCATAGAGGTTCTTTCCAAAGAAGTAAGGATTTGCATATGAATGAGGTGGTATTTTCAAGTAATAGAGAAAGCTCAGGAGAAAGGAACATGGATGACCTAGAGCTACCAATGTTTGATTTTAATACATTGACAATGGCTACAAACAACTTTTCTGAAGAAAATAAACTTGGGCAAGGAGGCTTTGGTAGTGTTTACAGGGGCAGGTTGATGGAAGACAAAGAAATTGCTGTTAAGAGGTTATCTAAAAACTCTGGACAAGGAATTGAAGAATTTAAAAACGAGGTCAAGTTAATTGCCAAGCTTCAACATCGAAATCTTGTTCGGCTACTTGGTTGCTGCATTGAGAAGGATGAGAAGCTGCTTGTGTACGAGTACATGGAAAATAAAAGCCTTGATTCCTTTTTGTTTAACAAAGCCAAAAAACCCTTACTGGATTGGGAAAGGCGCTTCAACATTATATGTGGAATAGCTAGAGGGCTTCTTTATCTGCATCATGATTCCAGATTAAGGATTATCCATAGGGATCTCAAGGCAAGCAACATTCTACTTGACAGTGAAATGAACCCAAAAATATCAGACTTTGGAATGGCTAGAATTTTTGGCACAGATCAGACAGAAGCAAACACATTGAGAATTGTTGGAACATATGGCTATATGTCTCCTGAATATGCTATGGATGGAAACTTCTCAGTCAAATCTGATGTTTTTAGCTTTGGAGTTCTTGTGCTGGAGATCATAACTGGAAAGAAAAATAGAGGATTCTATTACTCAAACGATGATATGAATCTTCTACAGAATACATGGAGACAGTGGAGAGAAGGCAATGCATTGGAACTTGTTGATTCATCAATTGGCAATTCATATTCACCATCTGAAGTTCTTAGATGCATACACGTTGGACTCTTGTGTGTCCAAGAACGTGCAGAAGATAGGCCAACAATGCCTTCAGTGATCTTGATGCTGAGCAGTGAAACTGCATTAATGCCACAACCCAGAAGCCCTGGTTTTTCCCTAGGAAAGAACCCTGCGCAGACCGATTCTTCTTCAAGTAAGCAAGATGAATCATGGAGTGTGAACCAAGTCACAGTCACATTGCTAAATGCTAGATAG 2553 0.4058 MRGFIKLLLFFLFWFITSLTFFTTISLSADTLTASQILRTNQTLESANKTFVLGFFPSSNSNSYLGIWYKNMKDRTVVWVANRDNPLDNSTGFLKIGNKGNIVLANSSENSVWSSNQTTATNPVVQLLDTGNLVLREANGSDPTKYLWQSFDYPADTLLPGMKMGWNLDTGTEKHLTSWRNTGQDPSTGDYSFKVDYHGLPEMFLWSNNQNRIIYKSGPWNGERFSGVPEMEPVTDSIMFNFTYDAHGVYYSFFIGNQTIFSRLMVTSGGELQRLTWVPSSQTWTKFWYAPKDQCDDYRECGPYGICDTNASPVCKCVGGFKPKNQQAWNLRDGSDGCVRNTNLDCGSDKFLHMQNVKLPETTKVFVNRSMNLLECKDLCHRNCSCTAYANIEITNGGTGCVFWIGELIDMRQYSNDGQDLYVRLAASEVDDSGAAVGSHKTNHKAEAVGITIAVAVIILGLGICLCKKRKLLSILNGKTDHRGSFQRSKDLHMNEVVFSSNRESSGERNMDDLELPMFDFNTLTMATNNFSEENKLGQGGFGSVYRGRLMEDKEIAVKRLSKNSGQGIEEFKNEVKLIAKLQHRNLVRLLGCCIEKDEKLLVYEYMENKSLDSFLFNKAKKPLLDWERRFNIICGIARGLLYLHHDSRLRIIHRDLKASNILLDSEMNPKISDFGMARIFGTDQTEANTLRIVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIITGKKNRGFYYSNDDMNLLQNTWRQWREGNALELVDSSIGNSYSPSEVLRCIHVGLLCVQERAEDRPTMPSVILMLSSETALMPQPRSPGFSLGKNPAQTDSSSSKQDESWSVNQVTVTLLNAR* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00434 850 ProSiteProfiles Protein kinase domain profile. 531 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00434 850 SMART blect_4 35 154 IPR001480 -
Rops11g00434 850 Pfam PAN-like domain 346 411 IPR003609 -
Rops11g00434 850 MobiDBLite consensus disorder prediction 811 838 - -
Rops11g00434 850 Pfam D-mannose binding lectin 76 180 IPR001480 -
Rops11g00434 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 607 810 - -
Rops11g00434 850 CDD PAN_AP_plant 342 426 - -
Rops11g00434 850 CDD STKc_IRAK 537 802 - -
Rops11g00434 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Rops11g00434 850 Pfam S-locus glycoprotein domain 215 325 IPR000858 GO:0048544
Rops11g00434 850 SMART serkin_6 531 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00434 850 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 181 IPR036426 -
Rops11g00434 850 Gene3D Hepatocyte Growth Factor 343 426 - -
Rops11g00434 850 Gene3D Phosphorylase Kinase; domain 1 505 606 - -
Rops11g00434 850 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Rops11g00434 850 Pfam Receptor serine/threonine kinase 487 521 IPR022126 GO:0004674
Rops11g00434 850 PIRSF SRK 2 850 IPR024171 GO:0004674
Rops11g00434 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 495 606 - -
Rops11g00434 850 SMART ntp_6 346 425 IPR003609 -
Rops11g00434 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 151 - -
Rops11g00434 850 CDD B_lectin 35 154 IPR001480 -
Rops11g00434 850 Gene3D Transferase(Phosphotransferase) domain 1 607 810 - -
Rops11g00434 850 ProSitePatterns Protein kinases ATP-binding region signature. 537 559 IPR017441 GO:0005524
Rops11g00434 850 ProSiteProfiles PAN/Apple domain profile. 346 426 IPR003609 -
Rops11g00434 850 SUPERFAMILY Protein kinase-like (PK-like) 511 802 IPR011009 -
Rops11g00434 850 Pfam Domain of unknown function (DUF3403) 804 850 IPR021820 GO:0004674
Rops11g00434 850 Pfam Protein tyrosine and serine/threonine kinase 534 799 IPR001245 GO:0004672|GO:0006468
Rops11g00434 850 Gene3D - 23 151 IPR036426 -
Rops11g00434 850 MobiDBLite consensus disorder prediction 818 838 - -
Rops11g00434 850 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00434 Rops-Chr11 5884545 5890284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00434 519 850 Receptor kinase-like Gene Family AT4G11530 61.128 1.99e-140 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g00434 PK_Tyr_Ser-Thr 3.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00434 - - gmx:100797331 1336.63