Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00433 ATGAATAAAGTTCTCATTATTATCTTTGTTTGTCTATCAGTCCTTCATGAAATGTCATATGTAGCTGATAACTTACCACCAACATCTTCAATTATAGATGGCCAAGAACTCAGTTCTGCTGGACAAATTTTTTCTCTTGGATTCTTCAGCCCAGGAAGCTCCAAAAGCCACTTCTTAGGGATATGGTACAAGAATATCACACCCCAAACAATTGTTTGGGTTGCAAACAGAGAGAAACCACTTAATGACTCGGGAGGGAACTTAACCATTGGTGCTGATGGGAATATAGTACTAGTTGATGGAGCAGGTAACAAAATATGGTTTACAAAGTCATCAAGACCAATTCACGAGCCAGTTGCAAAGCTGTTAGATTCTGGAAACTTAGTCTTGAAGGATGGAAAGAATGATGATTCTAATAGTTACATATGGCAAAGCTTTGACTATCCAACAGACACAATGATACCAGGCATGAAGTTGGGTTGGGATAAGGCCTCAGGTCTGAACAGATATTTGACTTCATGGAAGAGTGCTAATGATCCCTCTCCTGGAAACTTTACCTACAGCTCTGACCATAAAGAATTTCCTGAGTTGGTAATCCGCCAGGGAATGAATATCACATTCAGAAGTGGAATTTGGAATGGCATTCGTTTCAGTTCAGATGATTGGCTATCATTTACAGGAATTACAGCCTTCACGCCACAACTTTCAGTAGCCAACAATGAGGTAGTATATTGGGATGAACCTGGAGATAGATTGTCAAGGTTTGTGATGAGGGATGATGGATTGCTTGTAAGATATATATGGGACAACAAACTTCTTAAGTGGACTGAAATGTATGAGGCAAGAAAAGACTTCTGTGATAATTATGGAGCATGTGGGATAAATGGCGTTTGCAGTATTAATGACGTGCCTGTTTACTGTGATTGTTTGAAAGGCTTCATACCTAAATCACAGGAAGAATGGAATTCATTTAATCGCTTTGGTGGATGCATCAGGAGAACACCATTAAACTGCACACAAGGTGACAAGTTTCATAAATTAAGTTGGGTGAAGTTGCCTAAGCTGTTGCAATATTGGACAAATAATAGCATAAGTCTTAAAGAATGTGAGGTAGAGTGCTTGAAGAATTGTTCTTGCACTGCATATGCAAATTCTGCCATAAATGAAGGGCCACATGGCTGCTTGCTTTGGTATGGGGATTTGACTGACATTAGGCGGCTTATAAATGAAGAGGGTCCACAACTGGATCTTTATGTAAGGTTAGCTGCTTCAGAAATAGGGCAAAGAAATCAGAATGAAGATCAAACATCGCCTCTTTTTGATATAGATACTATTCTAGCTGCTACAAACAATTTTTCTATTGAGAACAAGATTGGGCAAGGGGGTTTTGGTCCAGTATACAAGGGTAAATTGGCTCGAGGACAAGAAATAGCTGTGAAAAGGCTATCAAAAACCTCTAAACAAGGCATCTCAGAGTTTATGAATGAAGTTGGTTTGGTAGCCAAACTTCAACATCGTAATCTTGTGAGTGTTTTGGGTGGGTGCACTCAAGGAAATGAAAGAATGTTGGTCTATGAATACATGCCTAATGGTAGTTTGAACTACTTCATTTTTGATCCCACAATAGGAAAAATTTTGCAGTGGAGGAAACGATATGAAATTATTGTGGGGATTGCTAGAGGACTACTTTATCTTCATCAAGATTCAAAACTAACCATCATTCATAGGGATCTAAAAACTAGTAATATTCTACTTGACAGCGAATTAAACCCCAAAATTTCTGATTTTGGTGTGGCCCACATCTTTGAAGGAGATCATTCTGCAGTGACAACAAAAAAAATTGTTGGGACAATTGGTTATATGTCCCCTGAGTATGCAGTAAATGGGCTTCTTTCCCTGAAGTCTGATGTATTTAGCTTTGGAGTTATAGTGTTAGAGATATTGAGTGGCATGAGAAATAATCACTTCAAACATCCAGATCATCACTATAATCTGTTGGGGCAGGCATGGACATTATGGAAAGAGGGACAAGCTGTAGAATTCATGGATGTTAATTTAGACCTTACAACTATCCCATCTGAATTACTAAGGTGCCTGCAAGTTGGTCTCCTGTGTGTTCAAAAGTTCCCTGAAGACAGACCAGATATGTCATCTGTGGTTTTCATGTTGGGCAACGAAAGTATTGCACTTGCCCAACCAAAGAAGCCTGGTTTCTATGAAGAAGAGTTAGAATTTCATGAGCACAACGAGAATGAGAGTTTCAGCAATAATGCTATGACTATTACCCTATTGGAAGCTCGAAATTAG 2307 0.3893 MNKVLIIIFVCLSVLHEMSYVADNLPPTSSIIDGQELSSAGQIFSLGFFSPGSSKSHFLGIWYKNITPQTIVWVANREKPLNDSGGNLTIGADGNIVLVDGAGNKIWFTKSSRPIHEPVAKLLDSGNLVLKDGKNDDSNSYIWQSFDYPTDTMIPGMKLGWDKASGLNRYLTSWKSANDPSPGNFTYSSDHKEFPELVIRQGMNITFRSGIWNGIRFSSDDWLSFTGITAFTPQLSVANNEVVYWDEPGDRLSRFVMRDDGLLVRYIWDNKLLKWTEMYEARKDFCDNYGACGINGVCSINDVPVYCDCLKGFIPKSQEEWNSFNRFGGCIRRTPLNCTQGDKFHKLSWVKLPKLLQYWTNNSISLKECEVECLKNCSCTAYANSAINEGPHGCLLWYGDLTDIRRLINEEGPQLDLYVRLAASEIGQRNQNEDQTSPLFDIDTILAATNNFSIENKIGQGGFGPVYKGKLARGQEIAVKRLSKTSKQGISEFMNEVGLVAKLQHRNLVSVLGGCTQGNERMLVYEYMPNGSLNYFIFDPTIGKILQWRKRYEIIVGIARGLLYLHQDSKLTIIHRDLKTSNILLDSELNPKISDFGVAHIFEGDHSAVTTKKIVGTIGYMSPEYAVNGLLSLKSDVFSFGVIVLEILSGMRNNHFKHPDHHYNLLGQAWTLWKEGQAVEFMDVNLDLTTIPSELLRCLQVGLLCVQKFPEDRPDMSSVVFMLGNESIALAQPKKPGFYEEELEFHEHNENESFSNNAMTITLLEARN* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00433 768 CDD STKc_IRAK 458 723 - -
Rops11g00433 768 Gene3D Transferase(Phosphotransferase) domain 1 528 735 - -
Rops11g00433 768 Pfam S-locus glycoprotein domain 207 317 IPR000858 GO:0048544
Rops11g00433 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 573 585 IPR008271 GO:0004672|GO:0006468
Rops11g00433 768 ProSiteProfiles Protein kinase domain profile. 452 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00433 768 SMART serkin_6 452 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00433 768 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 714 - -
Rops11g00433 768 Gene3D Phosphorylase Kinase; domain 1 418 527 - -
Rops11g00433 768 CDD PAN_AP_plant 334 422 - -
Rops11g00433 768 Pfam PAN-like domain 338 404 IPR003609 -
Rops11g00433 768 Pfam D-mannose binding lectin 70 175 IPR001480 -
Rops11g00433 768 SMART blect_4 28 149 IPR001480 -
Rops11g00433 768 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 180 IPR036426 -
Rops11g00433 768 CDD B_lectin 28 149 IPR001480 -
Rops11g00433 768 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 419 527 - -
Rops11g00433 768 Pfam Protein tyrosine and serine/threonine kinase 453 720 IPR001245 GO:0004672|GO:0006468
Rops11g00433 768 ProSiteProfiles PAN/Apple domain profile. 338 422 IPR003609 -
Rops11g00433 768 SUPERFAMILY Protein kinase-like (PK-like) 436 723 IPR011009 -
Rops11g00433 768 ProSiteProfiles Bulb-type lectin domain profile. 22 143 IPR001480 -
Rops11g00433 768 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 146 - -
Rops11g00433 768 Gene3D - 17 146 IPR036426 -
Rops11g00433 768 SMART ntp_6 339 421 IPR003609 -
Rops11g00433 768 PIRSF SRK 1 438 IPR024171 GO:0004674
Rops11g00433 768 PIRSF SRK 427 767 IPR024171 GO:0004674
Rops11g00433 768 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 528 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00433 Rops-Chr11 5879942 5884019 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00433 421 738 Receptor kinase-like Gene Family AT4G23230 53.333 9.83e-115 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g00433 PK_Tyr_Ser-Thr 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00433 - - gmx:102669607 1282.7