Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00430 ATGAGAGGTTCCACAAGCCTCCAAATCTTCTCTTATTGGATTTTCATGTTACCCCTGTTCTTTTCCAATACTGTACTATCGGTGGATACCTTAACTGCAACACAATCTCTTGGTGTAAACCAAACCCTTGTATCTCAAGGGAATGTGTTTGAGTTTGGCTTCTTTAATACAAAAAGTTCAAGATGGTACTTGGGTATATGGTACAAGGACTTTCCTGATAAAACAAAGGTTTGGGTGGCAAATAGAGACACCCCACTTGAAAATTCCAATGGAACTCTCAAGATTGGAGATGAGGGAAACCTGGTTCTTCTTAACCAAACAGGTGACCCCATATGGTCATCAAATCAAACCAATGGTACAAACCCGGTTCTCCAACTTTTGGACTCTGGAAATTTGGTTCTCATAGAAGCAAATGAGAGAAACACCACCAACTATATTTGGCAAAGCTTTGATCATCCAACAGATACTTTGTTACCTGGCATGAAGCTAGGTTGGAACCTTGACACTGGCGTGGAAATCCGTATAACATCATGGAAAAGCCAAGATGATCCATCAAGAGGAGATAATTATTTCAGTTTAAATTACCATGGGCTGCCAGATGTTTTCTTATGGAACAAAGAGGAAAGGATCTTTAGAACTGGACCATGGAATGGTGAAAAGTTGGGTGGAGTACCAATTCTAAACATAATTGCTGTTCTAAATGATTCTGTAGTTGCTGATGAACACCAAGTGTATTACATCACTTCAAATCTCAAACAATCTAATCTGTCCAGAATGGTTGTGAACTCGACTGGAGCAATTGAACGCTATGCATGGATAGAGAACAGTCAAAGTTGGAGCAAAATATGGTATGCACCTGCTAGCAATTGTGATCATTATGGAGTGTGTGGCCCGTTTGGTACCTGTGACTCAAATGCCTTCCCGATATGCAAGTGTATTGAAGGGTTCGACGTCAAGAATCAGAGGCAATGGGATTTGAAAAATTTTTCTGATGGGTGTACAAGGAAAACAGAATTGGAATGTGGGAGAGACAAGTTCTTGCACATGAAAAATATGCAATTGCCAGATACCACAGAGGTGTTTCTGAACAAGAGCATGACCCTGTTGGAATGTGAAAATATGTGTCAGAAGAATTGTTCTTGCACTGCCTATGCTAATGCAGAGATTACTAATGGTGGGACTGGTTGCGTGATGTGGACCAGTGATCTCTTAGATGTGAGGATGTTTGCTGAAGGTGGCCAAGATCTCTACGTCAGATTAGCAGCGTCTGATGTAGATGACAGTGACACAGGATCTTCTGGTGGCTCTGACAATAAAAAGAATGGAGGAAAGATTGCAGGAATTGCAGTTTCTGTAGCTGTCGTAATATTGGGAGTGATTATATTCATTTTGTGGAAGAAGAGGAAATTGCAGAATACATCAAAGGGGAATGCGCAGCATAATGGTAATATTGATAGAGGTCAGACAACGCTGCTACCTGAGGTAATACATTCAAATAACAGAGAACATGCAGATGAAAGGAACATGGATGACCTGGAGTTGCCATTGTTTGATTTTCATACCATAACAGAGGCTACAAACTACTTCTCTCTAGCAAATAAACTTGGAGAAGGAGGCTTTGGAAGTGTTTACAGGGGTAAGCTGGTGGATGGCCAAGAAATTGCTGTGAAAAGGTTATCAACAAGCTCTGGGCAAGGAAGTACAGAATTCAAGAATGAGGTCAGATCAATTGCAAAGCTTCAACATCGAAATCTAGTACGATTGTTGGCTTGCTGCATTGAGCAGGACGAGAAGATGTTGATCTATGAGTACATGGAAAACAACAGCCTAGATTCTATTTTATCTGACAAAGTAAAGAGTTCCCTATTAGACTGGCCAATGCGCTTCAACATTATATGTGGAATAGCCAAAGGGCTTCTTTATCTCCATCATGATTCCAGATTTAGAATTATCCATAGGGATCTCAAGGCAAGCAATATTCTTCTTGATAGGGAAATGAACCCAAAGATATCAGATTTTGGGATTGCTAGAATTTTTGACAATGATCAAACACAAGCAAACACAAGGAGAGTTGTTGGAACATATGGCTATATGTCTCCTGAATACGCAATGGGTGGATTCTTTTCAGTGAAATCTGATGTTTTTAGTTTTGGGGTACTTGTGTTAGAGATCATAAGTGGCAAGAAGAACAGAGGATTCTATTCCTCAGATGACCTAAATCTTCTTGGCCAATCATGGAGGCTTTGGAATGAAGGGAGTGCATTGGAAATAACAGATTCATCATATGCTGATTCATATTCAGTATCTGAAGTTCTGAGATGCATACATGTTGGTCTCATATGTGTCCAAGAACGAGCAGAAGATAGGCCTACAATGTATTCAGTGGCCATGATGTTGAACCGTGAAACTGCATCAATGCCACAACCTAAACAACCCGGTTTTGTCGTTGGAAGGAATCCAGATGAAACTGATTCTTCTTCTAGGCAAGAAGAATCACACTCTGTAAACCAAGTCACTGTTACAATAGTAGATGGCAGGTAG 2541 0.4042 MRGSTSLQIFSYWIFMLPLFFSNTVLSVDTLTATQSLGVNQTLVSQGNVFEFGFFNTKSSRWYLGIWYKDFPDKTKVWVANRDTPLENSNGTLKIGDEGNLVLLNQTGDPIWSSNQTNGTNPVLQLLDSGNLVLIEANERNTTNYIWQSFDHPTDTLLPGMKLGWNLDTGVEIRITSWKSQDDPSRGDNYFSLNYHGLPDVFLWNKEERIFRTGPWNGEKLGGVPILNIIAVLNDSVVADEHQVYYITSNLKQSNLSRMVVNSTGAIERYAWIENSQSWSKIWYAPASNCDHYGVCGPFGTCDSNAFPICKCIEGFDVKNQRQWDLKNFSDGCTRKTELECGRDKFLHMKNMQLPDTTEVFLNKSMTLLECENMCQKNCSCTAYANAEITNGGTGCVMWTSDLLDVRMFAEGGQDLYVRLAASDVDDSDTGSSGGSDNKKNGGKIAGIAVSVAVVILGVIIFILWKKRKLQNTSKGNAQHNGNIDRGQTTLLPEVIHSNNREHADERNMDDLELPLFDFHTITEATNYFSLANKLGEGGFGSVYRGKLVDGQEIAVKRLSTSSGQGSTEFKNEVRSIAKLQHRNLVRLLACCIEQDEKMLIYEYMENNSLDSILSDKVKSSLLDWPMRFNIICGIAKGLLYLHHDSRFRIIHRDLKASNILLDREMNPKISDFGIARIFDNDQTQANTRRVVGTYGYMSPEYAMGGFFSVKSDVFSFGVLVLEIISGKKNRGFYSSDDLNLLGQSWRLWNEGSALEITDSSYADSYSVSEVLRCIHVGLICVQERAEDRPTMYSVAMMLNRETASMPQPKQPGFVVGRNPDETDSSSRQEESHSVNQVTVTIVDGR* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00430 846 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 790 - -
Rops11g00430 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 494 604 - -
Rops11g00430 846 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Rops11g00430 846 Gene3D - 24 151 IPR036426 -
Rops11g00430 846 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Rops11g00430 846 ProSiteProfiles Protein kinase domain profile. 529 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00430 846 Pfam PAN-like domain 341 406 IPR003609 -
Rops11g00430 846 Gene3D Transferase(Phosphotransferase) domain 1 605 811 - -
Rops11g00430 846 Gene3D Phosphorylase Kinase; domain 1 493 604 - -
Rops11g00430 846 Pfam Domain of unknown function (DUF3403) 802 846 IPR021820 GO:0004674
Rops11g00430 846 Pfam D-mannose binding lectin 75 179 IPR001480 -
Rops11g00430 846 ProSitePatterns Protein kinases ATP-binding region signature. 535 557 IPR017441 GO:0005524
Rops11g00430 846 Pfam Protein tyrosine and serine/threonine kinase 531 795 IPR001245 GO:0004672|GO:0006468
Rops11g00430 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Rops11g00430 846 ProSiteProfiles PAN/Apple domain profile. 341 421 IPR003609 -
Rops11g00430 846 CDD STKc_IRAK 535 801 - -
Rops11g00430 846 MobiDBLite consensus disorder prediction 830 846 - -
Rops11g00430 846 SMART serkin_6 529 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00430 846 MobiDBLite consensus disorder prediction 806 846 - -
Rops11g00430 846 CDD PAN_AP_plant 337 421 - -
Rops11g00430 846 SMART ntp_6 341 420 IPR003609 -
Rops11g00430 846 PIRSF SRK 3 846 IPR024171 GO:0004674
Rops11g00430 846 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 184 IPR036426 -
Rops11g00430 846 CDD B_lectin 34 153 IPR001480 -
Rops11g00430 846 SMART blect_4 34 153 IPR001480 -
Rops11g00430 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 150 - -
Rops11g00430 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 605 807 - -
Rops11g00430 846 SUPERFAMILY Protein kinase-like (PK-like) 512 799 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00430 Rops-Chr11 5851202 5854714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00430 370 814 Receptor kinase-like Gene Family AT4G23190 46.304 8.42e-127 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g00430 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00430 - - aip:107621503 1154.04