Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00429 ATGGAGAAAACAGAGTTCACCCTTTTACTTCTTGCTACTTGTTGCTATTTGATATCCCTGTTTCCAATAGTTTTGGAAGCAGAAGATAGCATCACTCCACCACAAGCCATCAGTGGCAACAAGACACTAGTTTCACCATCCCAAAATTTTGAACTGGGTTTCTTCAGTCCTGGAAATTCCACTTACAGATATCTTGGAATATGGTACAAACATATTCCAAAACAAACTGTTGTTTGGGTTGCAAATAGAGACAAACCACTAGTCAATTCTAGTGGCTCCTTAACATTCAACAATGATGGTAAGCTCATCCTTCTAAGCCACACAGGAAGTGTTCTATGGTTCTCAAATTCATCTGGACCAGCAAAAAACCCTGTGGCTCAACTTCTAGACAATGGAAACTTTGTTTTGAAGGATTTCCAAGATGGAAACTCTGAGGGTTATTTGTGGAAGAGTTTTGATTATCCATCTGACACCTTGCTACCAGGAATGAAGCTTGGTTGGAACTTCAAAACTGGCTTGAACATACATTTGACTTCTTGGAAAAGCATCAATGATCCTTCTTCTGGAGAATATACTTACAGTGTGGATCCTCGTGGTCTTCCTCAGCTTTTTCTTCATAAGGGAAGCAAGAAGGTCTTCAGAAGTGGACCATGGTATGGACAACAATTTAAAGGTGACCCAGTTCTTAGGGAAAATCCAGTTTTCAAACCCATATTTGTTTTTGATTCTGATGAAGTGTCTTACTCATATGAGACTAAAGACAATATCTTATCAAGATTTGTGCTTACTCAATCTGGTTTGATTCAGCATTTCTCATGGAATGATCATCATTCAAGTTGGTTCTCTGAATTCACAGTTCAAGGAGACCATTGTGATGACTATGCCCTTTGTGGGGCTTATGGCACTTGCAACATCAAAAGCTCCCCTATTTGCAAGTGCTTGAAGGGTTTTGAGCCTAAGCTTCCACAAGAATGGAAAATGCTTAAGTGGTCAGGTGGATGTGACAGAAAGAATTTACAGGTTTGCAACAAAGGAGATGCATTTAAGCAGTTTACAGGAATGAAACTACCAGATGCTGCAGAGTTTCATACAAATTATAGCATCAGCATTGATCACTGTGAGGCAGAATGCTTGAAGAATTGCTCTTGTGTAGCTTATGCCAAACTAGACATAAATGCAAGTGGCAAAGGCTGTATTGCTTGGTTTGGTGATTTGTTCGATATAAGAGAGGATTCTGCGATTGGACAAGATTTCTACATGAGAGTTTCAGCTTCAGAACTAGATTCAAATGTTGAAGGAAACAAAAGGAAGAAACTCATACTGCTTCCTGTCACTATATCGGTAATCTCAACTGTTATCGTCTCAGCATTATGGTTGATAATTAAGAAATTGAGAAGAAATGGAGCTGGAGGGACAGGTATTCAATTTAGTGTTGGCAGAACTAGGAGTGAGAAGAATGAGTTTGAGCTCCCATTATTTGAGATTGCCATTATTGAAGCTGCCACAAGGAATTTCTCTATTGACAATAAGATTGGAGAAGGTGGATTTGGTCCTGTATACAAAGGTCAACTTCCATCTGGACAGGAAATAGCAGTGAAAAGGCTCTCAGAGAGCTCTGGACAAGGCCTGCAGGAGTTCAAGAATGAGGTTATTTTGATCTCCCAACTTCAGCATCGAAATCTTGTCAAGCTTCTAGGTTGTTGCATTCAGGGCGAAGATAAAATGTTGGTCTATGAGTACATGCCAAACAAAAGCTTGGACTCCTTATTATTTGATGAAACCAAGCGTTCTGTGCTCAGTTGGCAAAAGAGGCTAGACATTATTATTGGCATTGCTCGTGGGCTTCTCTACCTCCACAGAGATTCAAGACTAAGAATAATCCATAGAGACCTGAAAGCAAGCAATGTTCTTTTAGATAGTGAAATGAACCCAAAAATTTCTGACTTTGGAATGGCAAGAATGTTTGGTGGAGATCAAACTGAAGCAAAGACCAAGAGAGTAGTTGGAACCTATGGATACATGTCCCCAGAGTATGCAATGGATGGACACTTCTCTTTCAAATCTGATGTTTTTAGCTTTGGAGTTTTACTCTTAGAGGTGTTGAGCGGCAAGAAAAACAAAGGATTTTTGCACCCAGATCACAAGCTGAATCTCCTAGGTCATGCATGGAAGCTTTGGAATGAAGGTAAAGCCTTGGAGCTAATAGATCCATTGCTTGAGAATCAATTTCCCACCTCTGAAGCTCTAAGGTGTATTCAAGTGGGTCTTTCATGTGTTCAACAACAACCAGAAGATAGACCAACAATGTCATCAGTGCTTTTGATGTTGGACAGTGAGACTGTGTTGCTCCCTCAACCTAGAAGACCAGGATTATATTCGGAGAGATGTTTCTTAGACACAGATTCATCATCACGTGGTATGCTGAATTCTGGTTCCAATGACACTACTGTTACTTTAGTAGAAGGTCGCTAG 2472 0.4009 MEKTEFTLLLLATCCYLISLFPIVLEAEDSITPPQAISGNKTLVSPSQNFELGFFSPGNSTYRYLGIWYKHIPKQTVVWVANRDKPLVNSSGSLTFNNDGKLILLSHTGSVLWFSNSSGPAKNPVAQLLDNGNFVLKDFQDGNSEGYLWKSFDYPSDTLLPGMKLGWNFKTGLNIHLTSWKSINDPSSGEYTYSVDPRGLPQLFLHKGSKKVFRSGPWYGQQFKGDPVLRENPVFKPIFVFDSDEVSYSYETKDNILSRFVLTQSGLIQHFSWNDHHSSWFSEFTVQGDHCDDYALCGAYGTCNIKSSPICKCLKGFEPKLPQEWKMLKWSGGCDRKNLQVCNKGDAFKQFTGMKLPDAAEFHTNYSISIDHCEAECLKNCSCVAYAKLDINASGKGCIAWFGDLFDIREDSAIGQDFYMRVSASELDSNVEGNKRKKLILLPVTISVISTVIVSALWLIIKKLRRNGAGGTGIQFSVGRTRSEKNEFELPLFEIAIIEAATRNFSIDNKIGEGGFGPVYKGQLPSGQEIAVKRLSESSGQGLQEFKNEVILISQLQHRNLVKLLGCCIQGEDKMLVYEYMPNKSLDSLLFDETKRSVLSWQKRLDIIIGIARGLLYLHRDSRLRIIHRDLKASNVLLDSEMNPKISDFGMARMFGGDQTEAKTKRVVGTYGYMSPEYAMDGHFSFKSDVFSFGVLLLEVLSGKKNKGFLHPDHKLNLLGHAWKLWNEGKALELIDPLLENQFPTSEALRCIQVGLSCVQQQPEDRPTMSSVLLMLDSETVLLPQPRRPGLYSERCFLDTDSSSRGMLNSGSNDTTVTLVEGR* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00429 823 CDD STKc_IRAK 511 777 - -
Rops11g00429 823 CDD PAN_AP_plant 342 423 - -
Rops11g00429 823 PIRSF SRK 1 823 IPR024171 GO:0004674
Rops11g00429 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 186 IPR036426 -
Rops11g00429 823 Pfam Protein tyrosine and serine/threonine kinase 506 773 IPR001245 GO:0004672|GO:0006468
Rops11g00429 823 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Rops11g00429 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 784 - -
Rops11g00429 823 CDD B_lectin 37 155 IPR001480 -
Rops11g00429 823 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Rops11g00429 823 Pfam S-locus glycoprotein domain 213 320 IPR000858 GO:0048544
Rops11g00429 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 152 - -
Rops11g00429 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Rops11g00429 823 Gene3D Transferase(Phosphotransferase) domain 1 581 782 - -
Rops11g00429 823 SMART blect_4 34 155 IPR001480 -
Rops11g00429 823 SUPERFAMILY Protein kinase-like (PK-like) 488 790 IPR011009 -
Rops11g00429 823 Pfam D-mannose binding lectin 76 181 IPR001480 -
Rops11g00429 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 473 580 - -
Rops11g00429 823 Gene3D - 23 152 IPR036426 -
Rops11g00429 823 Pfam PAN-like domain 342 408 IPR003609 -
Rops11g00429 823 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 767 - -
Rops11g00429 823 ProSiteProfiles Protein kinase domain profile. 505 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00429 823 SMART serkin_6 505 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00429 823 SMART ntp_6 343 422 IPR003609 -
Rops11g00429 823 ProSiteProfiles PAN/Apple domain profile. 342 423 IPR003609 -
Rops11g00429 823 Gene3D Phosphorylase Kinase; domain 1 475 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00429 Rops-Chr11 5798450 5802265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00429 422 812 Receptor kinase-like Gene Family AT4G05200 52.405 2.40e-130 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g00429 PK_Tyr_Ser-Thr 4.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00429 - - gmx:100804024 1445.64