Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00403 ATGGCTTCTCGAAACCAGAACAGGCCACCACGAAGCCCCTCCAACAAAAAGGGAGGTGCTGAAGAAGTTCCCTCAGACAAGCGACGAAGGATTGTAGCAGAAAAAATGGAACGACAAGGTCGAGGTAGGGCTCCGTTTGGTGCAGTCAACAACAAGGTAGAAGATTCCAATGAGGGATCTGAATGCAGCACTGTTGAGTTCACTAAAGAGGAGGTTGAAGCGTTGCTCAATGAGAAGATGAAAAAGGGGAATCCGTTTGATAATAAGAAAAAAATGGAGCAGATGGCGGATCTCATTAAGCGGCTTAAACTTTGCGTTCGATGGTTTAAGAGAGTTGAAGAAGGGTATGTCCAAGAAAAAGAAAAGCTTCAGGCTGATCTAGAATCTTCCGAGAAGAAATGCATTGATATTGAGAATGACATGAAAATTAAGATGGCAGAGTTGAATGAGGCTATATCTAATTTGAGGATGACAATTTCCTCTTTGGAAGAGAGAATTGCAAAGGAGGAATCAGATAAATTGCAAGCCATGGATTGTTATAGAAAAGAAACGGAAGCCAGAAGTGCAGCTGAGCAGATGCAAGCTTCTCTTTCAACTGAGCTTGAGAAAGTTCGGGATGAGAAATCAGCTGCTGAGCGAAAGGCCATTTCAAATGAGGACCTGTACAAGCGATCACAAGAGTATAATATGAGTCTGCAACAGTACAATAGTCGCCTTCAGTCAGATCTTGAAACAACTAATGAGGCACATAAACGACTGGAAACAGAGAAAGCAACTATTGTTGAGAACCTTAGCAATGTAAGAGGACACAATAAGGCATTGCAGGATCAGTTGGCATCTCTTAAAGCTTCACAAGATGAGGCTACAAAGCAGAAAGAAATGTTAGCAAGTGAACTCAAATGCCTTCGGGAAGAATTAAAACAAATTAGAGATGATCGTGATCGCCAACTGGGACAAGTGCAAGTTTTGACCGGAGAAGTAGCAAAATACAAAGAATATACAGGGAAATCATGTGCACAATTGGATACCTTGACAATTAAAACAAATGCTCTTGAGGAAACATGTACTTCTCAAAGGGAGCAAATAAATATGCTGCAGCAGCAGTTGATTGCTGAAAAGGAGAAATTAAAGATGACTGATGTATCTGCTTCAGAAACAAGAACTGCTTTTGAAGATCAGAAAAGAATTATACGTGAACTACAAGAACGACTGGCAGATAAAGAATGCCAAATAATTGAAGGAGAGAAGTTAAGGAAAAAACTGCACAACACTATCCTGGAGCTCAAAGGAAATATTCGTGTGTTCTGCCGTGTCCGACCTCTGCTACCGGAGGATGGTCCTGGAACGGACTTGGTTGTTTCTTACCCTACGTCAACAGAAGCTCTTGGCCGGGGCATTGAATTGGTACAGAGTGGGCAGAAGTATCCTTTTACATTTGATAAGGTATTTAATCACGAGGCTTCTCAGCAAGCTGTTTTTGTAGAGATATCACAACTGGTACAAAGTGCGCTTGATGGGTACAAGGTCTGTATCTTTGCTTATGGACAGACTGGTTCAGGCAAAACCTATACAATGATGGGTAGGCCTGATGCCCCAGAGCTGAAAGGATTGATACCACGTTCTCTAGAACAGATATTCCAGATTAGTCAGTCCCTGAAAGATCAGGGGTGGAAGTACAAAATGCAGGCTTCAGTACTGGAAATATATAATGAGACCATCAGGGATTTGTTATCACCAAATCGGTCAAGTGGTAATGATCAAACAAGAACAGAAAATGGTGTTCCTGGAAAGCAGTACACTATTAAACACGATGCCAATGGTAACACACATGTTTCAGACCTCACTATTGTGGATGTTTCCAGTGTAAATGAGATTTCCTCCCTCCTGCAACAGGCTGCGCAAAGCAGGTCAGTAGGAAGAACACAGATGAATGAACAATCATCACGAAGTCATTTTGTCTTCACTTTGCGTATATGTGGGTTTAATGAGAACACTGAACAACAAGTGCAAGGTGTGTTAAACCTGATTGATCTTGCTGGAAGTGAAAGACTATCGAAAAGTGGAGCAACTGGGGACCGGTTGAAGGAAACTCAGGCTATCAACAAAAGTCTCTCCTCTTTGAGTGATGTCATATTTGCTTTGGCGAAGAAAGAGGAGCATGTCCCCTTTAGAAATTCAAAACTGACATACCTTCTCCAGCCATGTCTTGGTGGAGATTCCAAAACTTTGATGTTTGTCAACATCTCACCAGATCCATCATCAACTGGAGAGTCACTTTGCTCTCTTCGTTTTGCGGCCAGAGTCAACTCCTGCGAGATTGGTATTCCACGGCGTCAGACATCCTCGCGGTCCTTTGATTCTCGTTTGAGCTATGGCTAA 2379 0.4233 MASRNQNRPPRSPSNKKGGAEEVPSDKRRRIVAEKMERQGRGRAPFGAVNNKVEDSNEGSECSTVEFTKEEVEALLNEKMKKGNPFDNKKKMEQMADLIKRLKLCVRWFKRVEEGYVQEKEKLQADLESSEKKCIDIENDMKIKMAELNEAISNLRMTISSLEERIAKEESDKLQAMDCYRKETEARSAAEQMQASLSTELEKVRDEKSAAERKAISNEDLYKRSQEYNMSLQQYNSRLQSDLETTNEAHKRLETEKATIVENLSNVRGHNKALQDQLASLKASQDEATKQKEMLASELKCLREELKQIRDDRDRQLGQVQVLTGEVAKYKEYTGKSCAQLDTLTIKTNALEETCTSQREQINMLQQQLIAEKEKLKMTDVSASETRTAFEDQKRIIRELQERLADKECQIIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPEDGPGTDLVVSYPTSTEALGRGIELVQSGQKYPFTFDKVFNHEASQQAVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPELKGLIPRSLEQIFQISQSLKDQGWKYKMQASVLEIYNETIRDLLSPNRSSGNDQTRTENGVPGKQYTIKHDANGNTHVSDLTIVDVSSVNEISSLLQQAAQSRSVGRTQMNEQSSRSHFVFTLRICGFNENTEQQVQGVLNLIDLAGSERLSKSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAARVNSCEIGIPRRQTSSRSFDSRLSYG* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00403 792 Coils Coil 390 417 - -
Rops11g00403 792 ProSiteProfiles Kinesin motor domain profile. 431 771 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops11g00403 792 Coils Coil 271 319 - -
Rops11g00403 792 MobiDBLite consensus disorder prediction 1 64 - -
Rops11g00403 792 Pfam Kinesin motor domain 437 770 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops11g00403 792 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 391 770 IPR027417 -
Rops11g00403 792 Gene3D Kinesin motor domain 372 773 IPR036961 -
Rops11g00403 792 PANTHER KINESIN-LIKE PROTEIN KLP-3 280 779 IPR027640 GO:0003777|GO:0007018
Rops11g00403 792 Coils Coil 187 214 - -
Rops11g00403 792 Coils Coil 348 375 - -
Rops11g00403 792 MobiDBLite consensus disorder prediction 577 595 - -
Rops11g00403 792 PRINTS Kinesin heavy chain signature 672 690 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops11g00403 792 PRINTS Kinesin heavy chain signature 641 658 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops11g00403 792 PRINTS Kinesin heavy chain signature 721 742 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops11g00403 792 PRINTS Kinesin heavy chain signature 506 527 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops11g00403 792 MobiDBLite consensus disorder prediction 577 605 - -
Rops11g00403 792 CDD KISc_C_terminal 429 773 - -
Rops11g00403 792 Coils Coil 236 263 - -
Rops11g00403 792 FunFam Kinesin-like protein 377 773 - -
Rops11g00403 792 SMART kinesin_4 429 779 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops11g00403 792 MobiDBLite consensus disorder prediction 20 41 - -
Rops11g00403 792 Coils Coil 145 172 - -
Rops11g00403 792 ProSitePatterns Kinesin motor domain signature. 671 682 IPR019821 GO:0003777|GO:0005524|GO:0007018
Rops11g00403 792 Coils Coil 113 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00403 Rops-Chr11 5467470 5474529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00403 340 783 Calmodulin-binding Proteins AT5G65930 36.344 2.24e-78 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00403 K10405 - gmx:100818473 1322.38