Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00391 ATGAAGTCTACCACAAGAAATTTCAGTGTTCTCCAGATTTTGTGGCCATTGTTCTGTCTCTTTAAGGCAGGTTATGGTGCTGAAAGTGACATCTTTTGCTTACAAACCATCAAGAATTCGTTGGACCAATTTAATCATTTATCAAGCTGGGATTTAAACAGCAACACTGAAGGTTACATATGTGGATTTATTGGTGTTGAATGCCAGAATAATATGGAAGATAGAATAATTGGTCTTTGGCTTTCTCATATGGGGTTGGAGGGCCAATTTCCTCGTTGCATTGAAAATTTCACATGGTTGCAGAATTTGGACCTCTCAAACAACGAACTTTCTGGATGTATCCCAACTGATATATCAAGTAAGTTACCATATCTAACCTCACTTGATCTCTCAAATAACAATTTTTATGGTGAAATTCCAAAGGGTATTGCCAACTTCTATCACTTGGATACCCTTAGACTCTATGGCAACGAGTTAACTGGCCAAATCCCTCGAGAACTTGGGTTGCTTCCCCAGATTAGAGTTTTTAGTGTTGCTAACAATTTCTTAACAGGGCCAGTGCCTGTTTTTGTCGACAATGTTGATGTGAGTTTGAGTTACACCAACAATAGTGGACTTTGTGGGGGAAAACTAAGAAGCTGTGATGAGAGTCTGTTTGATAGATCATTTTGGTATAGTTTTGTTATTGGTTTTGTTTGGTCAGCAACTTCTTTCGTGTATTATTATGTACCTTGGACAAAATTCAAGAAGAGGAGTAATGCTATACATCCCATAAAGAAGCAGAACCATCTAAAGGACACTAGACAAGTAACTGAATTGCTACCACTGGCCTTACAAGAGCAAGGAAACAAAGAGTTCACAAGATTGTTGGAGAGATTGATTCCAAGAATGAGCTTCACGAATCTATGCAAGGCATCTGATCACTTTAGCGCAAACAACATGTTGGGACTAGGAACAACAGGGATTATGTACAAAGCAAAGGTACCTAATAACTGTTTCCTAGCAGTTAAGAGATTATATGATGCTGATAAGTACAAGAGGGAGTTCTTGCTTGAAATGATGATTCCAGAGAGACAGAGACACAGAAACATAGCTCCTCTGGTTGCATTCTGCATAGAAAGAAATGAAAGGATTCTAGTGTACAAGTACATGTCTAATGGAAGACTCTGTGATTGGTTACATCCTGATGAAGGACATCAAACTATGATATTAGAATGGCTTGAGAGGATTCACATTGCACTTGGGCTAGCAAGATGTTTATCTTGGCTTCATAATAAGTGCAAGATTGTTCATCTCAATCTAGGTTCAGAGAGTGTCTTGCTAGACAAGAATTTAGAACCAAAAATTTCCAATTTTGGAAAAGCAAAATTCATAAACCAGACGGTTGAAGATCGTGAAAAGATGAAATTGTTTTTGATTGATGGAGTTGGGGTGAAAGGTGGTATTGAGAGGGATGTTTATGACTTTGGTATAATCCTTTTTGAGCTTATAACAGGGAAAAGATTAAGTCCAACGACTGATTCTTCTGACAATGTTGATGGCTCTTTGATGAACTATATTAGAAATAACTTGTTCAATGATCCTATTGATTTTTATGATTCCATTGATAAATCTATCATTGGTACAGGATTTGATCCCAAAATTCTTTGTCTCCTAGAAGTTGCATGTGACTGTGTTAAGCCTTCTTTGGTGCAAAGGCCAAAGATGGTTGATGTGTACAAAACTATAAGAGCCATGTGGGAGGGTTACAGACCCTGGTTTGATTCTGAAAGGCTGAGTTGTCCTGATCGGATAACATATGGCAAGGAAATAGAATGTATTTATTGA 1827 0.3771 MKSTTRNFSVLQILWPLFCLFKAGYGAESDIFCLQTIKNSLDQFNHLSSWDLNSNTEGYICGFIGVECQNNMEDRIIGLWLSHMGLEGQFPRCIENFTWLQNLDLSNNELSGCIPTDISSKLPYLTSLDLSNNNFYGEIPKGIANFYHLDTLRLYGNELTGQIPRELGLLPQIRVFSVANNFLTGPVPVFVDNVDVSLSYTNNSGLCGGKLRSCDESLFDRSFWYSFVIGFVWSATSFVYYYVPWTKFKKRSNAIHPIKKQNHLKDTRQVTELLPLALQEQGNKEFTRLLERLIPRMSFTNLCKASDHFSANNMLGLGTTGIMYKAKVPNNCFLAVKRLYDADKYKREFLLEMMIPERQRHRNIAPLVAFCIERNERILVYKYMSNGRLCDWLHPDEGHQTMILEWLERIHIALGLARCLSWLHNKCKIVHLNLGSESVLLDKNLEPKISNFGKAKFINQTVEDREKMKLFLIDGVGVKGGIERDVYDFGIILFELITGKRLSPTTDSSDNVDGSLMNYIRNNLFNDPIDFYDSIDKSIIGTGFDPKILCLLEVACDCVKPSLVQRPKMVDVYKTIRAMWEGYRPWFDSERLSCPDRITYGKEIECIY* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00391 608 SUPERFAMILY Protein kinase-like (PK-like) 290 575 IPR011009 -
Rops11g00391 608 Gene3D Transferase(Phosphotransferase) domain 1 384 585 - -
Rops11g00391 608 Pfam Protein kinase domain 312 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00391 608 Gene3D Phosphorylase Kinase; domain 1 273 383 - -
Rops11g00391 608 ProSiteProfiles Protein kinase domain profile. 309 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00391 608 SUPERFAMILY L domain-like 29 217 - -
Rops11g00391 608 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Rops11g00391 608 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 578 IPR046959 -
Rops11g00391 608 FunFam Nuclear pore complex protein NUP107 27 189 - -
Rops11g00391 608 Gene3D Ribonuclease Inhibitor 29 215 IPR032675 -
Rops11g00391 608 PRINTS Leucine-rich repeat signature 100 113 - -
Rops11g00391 608 PRINTS Leucine-rich repeat signature 122 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00391 Rops-Chr11 5325841 5328148 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00391 28 581 Receptor kinase-like Gene Family AT3G28450 33.276 2.65e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Rops11g00391 Pkinase 8.4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00391 - - gmx:106795644 895.96