Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00387 ATGAGCTTCACGAATCTATGCAAGGCAACTGATTACTTTAGCGCAAGCAACATGTTGGGACTAGGAACAACAGGGATTATGTACAAAGCAAAGGTACCTAATAACTGTCTCCTAGCAGTTAAGAGATTATATGATGCTGATAAGTACAAGAGGGAGTTCTTGCTTGAAATTATGATTCCAGGGAGACAGAGACACAGAAACATAGCTCCTCTGCTTGGATTCTGCATAGAAAGAAATGAAAGGATTCTGGTGTACAAGTACATGTCAAATGGAAGACTCAGTGATTGGCTACATCCTGATGAAGGACATCAAACTACGATATTGGAATGGCCCGAGAGGATTCACATTGCACTTGGGCTAGCAAGAGGTTTATCTTGGCTTCATAATAAGTGCAAGATTGTCCATCTCAATCTAGGTTCAGAGAGTGTCTTGCTAGACAAGAATTTAGAACCAAAAATTTCCAATTTTGGAAAAGCAAAATTCATAAACCAGACGATTGAAGATCATGAAAAGATGAAATTGTTTTTGATTGATGGAGTTGGGGTGAAGGGTGGTATTGAGAGGGATGTCTGTGACTTTGGTATAATCCTTTTTGAGGTTATAACAGGGAAAAGATTAAGTCCAATGACTGACTCTTCTGACAATGTTGATGGCTCTTTGATGAAGTATATTAGCAATAAGTTGTTCAATGATCCTATTGATTTTTATGATGCCATTGATAAATCTATCATTGGTACAGGATTTGATCCCAAAATCCTTTGTCTCCTAGAAGTTGCATGTGACTGTGTTGAGCCTTCTTTGGTGCAAAGGCCAAAGATGGTTGATGTGTACAAAACTATAAGAGCCATGTGGGACGATTCTGAGACCCTGGTTTGA 876 0.3893 MSFTNLCKATDYFSASNMLGLGTTGIMYKAKVPNNCLLAVKRLYDADKYKREFLLEIMIPGRQRHRNIAPLLGFCIERNERILVYKYMSNGRLSDWLHPDEGHQTTILEWPERIHIALGLARGLSWLHNKCKIVHLNLGSESVLLDKNLEPKISNFGKAKFINQTIEDHEKMKLFLIDGVGVKGGIERDVCDFGIILFEVITGKRLSPMTDSSDNVDGSLMKYISNKLFNDPIDFYDAIDKSIIGTGFDPKILCLLEVACDCVEPSLVQRPKMVDVYKTIRAMWDDSETLV* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00387 291 SUPERFAMILY Protein kinase-like (PK-like) 3 279 IPR011009 -
Rops11g00387 291 ProSiteProfiles Protein kinase domain profile. 13 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00387 291 Pfam Protein tyrosine and serine/threonine kinase 16 205 IPR001245 GO:0004672|GO:0006468
Rops11g00387 291 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 280 - -
Rops11g00387 291 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Rops11g00387 291 Gene3D Transferase(Phosphotransferase) domain 1 88 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00387 Rops-Chr11 5270495 5271370 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00387 1 285 Receptor kinase-like Gene Family AT1G27190 34.122 7.88e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Rops11g00387 PK_Tyr_Ser-Thr 1.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00387 - - gmx:106795644 458.759