Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops11g00383 | ATGAAGTCTACCACAAGAAATTTGAGTGTTCTCCAGATTTTGTGGCCATTGTTCTGTCTCTTTAAGCCAGGTTATGGTGCTGAAAGTGACATCTTTTGCTTACAAACCATCAAGAATTCGTTGGATCAATTTAATCATTTATCAAGCTGGGATTTCAACAGCAACACTGAAGGTTACATATGTGGATTTATTGGTGTTGAATGTCAGAATAATATGGAAGATAGAATAATTGATCTTTGGCTTTCTCATATGGGGTTGGAGGGCCAGTTTCCTCGTTGCATTGAAAATTTCACATGGTTGCAGAATTTGGACCTCTCAAACAACGAACTTTCTGGATATATCCCAACTGATATATCAAGTAAGTTGCCATATCTAACCTCACTTGATCTCTCAAATAACAATTTTTATGGTGAAATTCCAAAGGGTATTGACAACTTCTCTCACTTGGATACCCTTAGACTTGATGGCAACCAGTTAACTGGCCAAATCCCTCCAGAACTTGGGTTGCTTCCCCAAATTAGAGTTTTTAGTGTTGCTAACAATTTCTTAACAGGGCCAGTGCCTGTTTTTGTCGGCAATGTTGATGTGAGTTTGAGCTACACCAACAATAGTGGACTCTGTGGGGGAAAACTAAGAAGTTGTGATGAGAGTCTGTTTGATAGATCGTTTTGTTGTGATTGGTTACATCCTGATGAAGGACATCAAACTACGATATTGGAATGGCCCGAGAGGATTCACATTGCACTTGGGCTAGCAAGAGGTTTATCTTGGCTTCATAATAAGTGCAAGATTGTCCATCTCAATCTAGGTTCAGAGAGTGTCTTGCTAGACAAGAATTTAGAACCAAAAATTTCCAATTTTGGAAAAGCAAAATTCATAAACCAGACGATTGAAGATCATGAAAAGATGAAATTGTTTTTGATTGATGGAGTTGGGGTGAAGGGTGGTATTGAGAGGGATGTCTATGACTTTGGTATAATCCTTTTTGAGGTTATAACAGGGAAAAGATTAAGTCCAATGACTGACTCTTCTGACAATGTTGATGGCTCTTTGATGAAGTATATTAGCAATAAGTTGTTCAATGATCCTATTGATTTTTATGATGCCATTGATAAATCTATCATTGGTACAGGATTTGATCCCAAAATCCTTTGTCTCCTAGAAGTTGCATGTGACTGTGTTAAGCCTTCTTTGGTGCAAAGGCCAAAGATGGTTGATGTGTACAAAACTATAAGAGCCATGTGGGACGGTTACAGACCCTGGTTTGATTCTGAAAGGCTGAGTTGTCCTGATCAGATAACATATGGCAACGAAATAGAATGTATTTATTGA | 1332 | 0.3814 | MKSTTRNLSVLQILWPLFCLFKPGYGAESDIFCLQTIKNSLDQFNHLSSWDFNSNTEGYICGFIGVECQNNMEDRIIDLWLSHMGLEGQFPRCIENFTWLQNLDLSNNELSGYIPTDISSKLPYLTSLDLSNNNFYGEIPKGIDNFSHLDTLRLDGNQLTGQIPPELGLLPQIRVFSVANNFLTGPVPVFVGNVDVSLSYTNNSGLCGGKLRSCDESLFDRSFCCDWLHPDEGHQTTILEWPERIHIALGLARGLSWLHNKCKIVHLNLGSESVLLDKNLEPKISNFGKAKFINQTIEDHEKMKLFLIDGVGVKGGIERDVYDFGIILFEVITGKRLSPMTDSSDNVDGSLMKYISNKLFNDPIDFYDAIDKSIIGTGFDPKILCLLEVACDCVKPSLVQRPKMVDVYKTIRAMWDGYRPWFDSERLSCPDQITYGNEIECIY* | 444 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops11g00383 | 443 | FunFam | Nuclear pore complex protein NUP107 | 27 | 189 | - | - | |
Rops11g00383 | 443 | Pfam | Leucine rich repeat | 100 | 159 | IPR001611 | GO:0005515 | |
Rops11g00383 | 443 | Pfam | Protein kinase domain | 240 | 353 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops11g00383 | 443 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 225 | 413 | IPR046959 | - | |
Rops11g00383 | 443 | Gene3D | Ribonuclease Inhibitor | 29 | 215 | IPR032675 | - | |
Rops11g00383 | 443 | Gene3D | Transferase(Phosphotransferase) domain 1 | 225 | 418 | - | - | |
Rops11g00383 | 443 | SUPERFAMILY | Protein kinase-like (PK-like) | 226 | 421 | IPR011009 | - | |
Rops11g00383 | 443 | SUPERFAMILY | L domain-like | 29 | 269 | - | - | |
Rops11g00383 | 443 | PRINTS | Leucine-rich repeat signature | 122 | 135 | - | - | |
Rops11g00383 | 443 | PRINTS | Leucine-rich repeat signature | 100 | 113 | - | - | |
Rops11g00383 | 443 | ProSiteProfiles | Protein kinase domain profile. | 125 | 422 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops11g00383 | Rops-Chr11 | 5220641 | 5222415 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops11g00383 | 239 | 414 | Receptor kinase-like Gene Family | AT3G28450 | 27.368 | 2.69e-17 | 82.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xa | Rops11g00383 | Pkinase | 1.9e-08 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops11g00383 | - | - | gmx:106795644 | 338.191 |