Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00369 ATGTTCGCCGGAGGAATTTCCCGTCATGGGTCACTGACCATTTTTCTCACTGCTCTGTTTTTCCTCTGCCTCGTGACTTTCTCTCGGTCAGATGAGGTTCAATCACTTATGAAGTTCAAGTCCTCTATCCAAAGTTCAAATGCAAGTGTTTACAGTTCTTGGACACAAGCAAATTCTCCCTGCCACTACACAGGGATTGTTTGCAATTCAAATGGTTTTGTTTCAGAAATCAATCTTCCACAGAAACAACTAGTGGGTACTCTTCCTTTTGATTCAATTTGCGACCTTCAATCTCTTGAGAAAATCTCTTTGGAGTCCAACTTCTTGCATGGAAGCATCAGTGAGGAGTTGAGGAAGTGCACCAACTTGAAGTACTTGGATTTGGGTGGGAACTCATTCACTGGAGCAGTGCCTGACTTGTCAACTTTGAACAAGTTGCAGTACTTGAATTTAAGTGCAAGTGGAATTTCCGGGGCATTTCCATGGAAATCATTGGAAAATTTCACCAGTCTCACTTTCTTGAGCCTTGGTGATAACCTATTGGAAAGAACTTCTTTCCCTTTGGAGGTCTTAAAGCTTGAAAAATTGTATTGGCTTTACCTCACAAATTGCAGCATCACAGGTAATATCCCAAAGGGTATTGGAAATCTTACACAGCTTCAGAATCTTGAGCTTTCTGATAACCAATTATCAGGTGAGATTCCACCTGATATTGGAAAGCTTCAAAGGCTTTGGAGACTTGAGCTATATGACAACTATTTAAGTGGGAAAATCCCAGTTGGATTTGGCAACCTTACCAATCTTGTCTACTTTGATGCTTCTAATAATCAGCTTGAAGGTGATCTTTCTGAGATAAGGTCCTTGAAAAACCTTACATCCCTTCAGCTTTTTCAGAACCAATTCTCAGGAGAGATTCCAGAAGAGCTTGGAGATCTCAAAAACCTTACAGAACTTTCTCTTTATGCTAACAATCTCACTGGTCCTCTTCCTCAAAAGCTTGGCTCCTGGGGAGGCATGCAATTCATTGATGTTTCAGACAACAAGCTTTCTGGTCCTATACCTCCTGATATGTGCAAGAACAACGAGTTTACTGATCTAGCACTGTTAAACAATAGCTTCAATGGAACTATACCAGAAACATACGCAAACTGCACATCTTTGGGTCGTTTCCGTGTAAATAAGAATTCACTTTCGGGGATTGTTCCTTCAGGCATGTGGGGCTTGCCAAATCTGGAAATAATCGATCTTAGAATGAACAAGTTTGAAGGTCCAGTATCATCTGATATTGGCAAAGCAAAATCTCTTGCTCAACTGTTTTTATCTGACAATCAGTTCTCAGGTGAGTTGCCATTGGAAATCTCAGAAGCTTCTTCATCGGTATCAATTCTGCTAAGTTCAAATCAAATTTCAGGTCACATCCCAGAAAGTATTGGCAGATTGAAGAAACTAACTAGTCTTACTTTGGATAAGAACAACCTCTCTGGTATTATACCAGATTCTATTGGTTCTTGTATTTCTCTTACTGAAATAAACCTTGCTGGTAACTCTCTTTCTGGGGTAATACCAGCTAGCATTGGGTCTCTTCCTACCCTCAATTCATTGAACTTGTCCTCAAACAAGCTTTCTGGTGAAATTCCATCAAGTTTATCATATCTGAGACTTAGCCTTCTTGATTTATCAAACAACCGGTTGTTTGGTTCCATACCAGATTTGCCGGCTATTTCAGCCTTCAAAGATGGGTTCATGGGAAATCCTGGCTTATGCAGCCAGACTTTGAATAATTTCCCACCATGTTCATTGGAATCTGGCAACTCCAGGCGACTCAGAAACCTTGTACTCATTTTCATTTCTGGTTTAATGGTTCTGCTTGTTGCATCAGCATATTTCCTCTTCATGAAACTGAAGCAGAACAAGTTAGAGAAGCCACTGAAGACTAATTCTTGGGATTTAAAGCAGTACCATGTGCTAAACTTCAATGAGAATGAAATTTTTGATGGGATCAAGACTGAGAATTTGATTGGCAAAGGAGGGTCAGGGAATGTTTACAAGATTGTGCTTAAAAGTGGGGAAGAATTTGCAGTCAAACATATATGGACTTCAAATCCGAGTGATAGGGGAAGTTGCAGGAGTAGCACAGCTATGTTGAGAAGGAGTTCCCGTTCACCTGAGGTGACAGAGAAGAGCGATGTTTACAGCTTTGGGGTAGTCCTGATGGAGTTGGTAACGGGGAAGAGGCCTATGGAACCAGAGTTTGGTGAGAATAAGGACATTGTTCATTGGGTATGCAGCAATATTAGGAACATAGAAAATGCACTTGAATTAGTGGATTCTACCATTTCAAAGCATCACAAAGAAGATGCCTTGAAGGTGTTGAGAACTGCCACATTATGCACTGCAAAACTTCCAGCTTCAAGACCATCAATGAGAATGTTGGTTCAAATGCTAGAAGAGGCAGAACCTTGTGCTCCCCAAATGATTATGACCATAGATGGTTAA 2496 0.4067 MFAGGISRHGSLTIFLTALFFLCLVTFSRSDEVQSLMKFKSSIQSSNASVYSSWTQANSPCHYTGIVCNSNGFVSEINLPQKQLVGTLPFDSICDLQSLEKISLESNFLHGSISEELRKCTNLKYLDLGGNSFTGAVPDLSTLNKLQYLNLSASGISGAFPWKSLENFTSLTFLSLGDNLLERTSFPLEVLKLEKLYWLYLTNCSITGNIPKGIGNLTQLQNLELSDNQLSGEIPPDIGKLQRLWRLELYDNYLSGKIPVGFGNLTNLVYFDASNNQLEGDLSEIRSLKNLTSLQLFQNQFSGEIPEELGDLKNLTELSLYANNLTGPLPQKLGSWGGMQFIDVSDNKLSGPIPPDMCKNNEFTDLALLNNSFNGTIPETYANCTSLGRFRVNKNSLSGIVPSGMWGLPNLEIIDLRMNKFEGPVSSDIGKAKSLAQLFLSDNQFSGELPLEISEASSSVSILLSSNQISGHIPESIGRLKKLTSLTLDKNNLSGIIPDSIGSCISLTEINLAGNSLSGVIPASIGSLPTLNSLNLSSNKLSGEIPSSLSYLRLSLLDLSNNRLFGSIPDLPAISAFKDGFMGNPGLCSQTLNNFPPCSLESGNSRRLRNLVLIFISGLMVLLVASAYFLFMKLKQNKLEKPLKTNSWDLKQYHVLNFNENEIFDGIKTENLIGKGGSGNVYKIVLKSGEEFAVKHIWTSNPSDRGSCRSSTAMLRRSSRSPEVTEKSDVYSFGVVLMELVTGKRPMEPEFGENKDIVHWVCSNIRNIENALELVDSTISKHHKEDALKVLRTATLCTAKLPASRPSMRMLVQMLEEAEPCAPQMIMTIDG* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00369 831 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Rops11g00369 831 SMART LRR_sd22_2 217 232 - -
Rops11g00369 831 SMART LRR_sd22_2 265 293 - -
Rops11g00369 831 SMART LRR_sd22_2 120 151 - -
Rops11g00369 831 SMART LRR_sd22_2 168 190 - -
Rops11g00369 831 SMART LRR_sd22_2 96 119 - -
Rops11g00369 831 SMART LRR_sd22_2 312 346 - -
Rops11g00369 831 Gene3D Ribonuclease Inhibitor 286 357 IPR032675 -
Rops11g00369 831 SMART LRR_typ_2 480 504 IPR003591 -
Rops11g00369 831 SMART LRR_typ_2 96 120 IPR003591 -
Rops11g00369 831 SMART LRR_typ_2 168 193 IPR003591 -
Rops11g00369 831 SMART LRR_typ_2 288 311 IPR003591 -
Rops11g00369 831 SMART LRR_typ_2 312 336 IPR003591 -
Rops11g00369 831 SMART LRR_typ_2 217 241 IPR003591 -
Rops11g00369 831 SMART LRR_typ_2 528 552 IPR003591 -
Rops11g00369 831 SUPERFAMILY RNI-like 323 636 - -
Rops11g00369 831 Gene3D Ribonuclease Inhibitor 358 454 IPR032675 -
Rops11g00369 831 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Rops11g00369 831 FunFam Leucine-rich receptor-like protein kinase family protein 188 284 - -
Rops11g00369 831 Gene3D Phosphorylase Kinase; domain 1 651 720 - -
Rops11g00369 831 Pfam Leucine rich repeat 506 564 IPR001611 GO:0005515
Rops11g00369 831 PRINTS Leucine-rich repeat signature 528 541 - -
Rops11g00369 831 PRINTS Leucine-rich repeat signature 220 233 - -
Rops11g00369 831 FunFam Receptor-like protein kinase HSL1 290 596 - -
Rops11g00369 831 SUPERFAMILY Protein kinase-like (PK-like) 661 814 IPR011009 -
Rops11g00369 831 Pfam Protein tyrosine and serine/threonine kinase 722 815 IPR001245 GO:0004672|GO:0006468
Rops11g00369 831 Gene3D Ribonuclease Inhibitor 188 285 IPR032675 -
Rops11g00369 831 Gene3D Transferase(Phosphotransferase) domain 1 721 824 - -
Rops11g00369 831 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 723 817 - -
Rops11g00369 831 SUPERFAMILY RNI-like 76 421 - -
Rops11g00369 831 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Rops11g00369 831 ProSiteProfiles Leucine-rich repeat profile. 553 575 IPR001611 GO:0005515
Rops11g00369 831 Gene3D Ribonuclease Inhibitor 455 599 IPR032675 -
Rops11g00369 831 FunFam Probable inactive receptor kinase RLK902 29 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00369 Rops-Chr11 5065031 5068727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00369 723 821 Receptor kinase-like Gene Family AT1G09970 62.626 8.28e-36 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops11g00369 PK_Tyr_Ser-Thr 5.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00369 - - gmx:100811489 1090.49