Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00366 ATGGATACAATTGTTGAGGAAAGTTTTGTTGATCTGAATGATGATGGAGATTTGAATATGAGCCCTTGTGATGGGTCTGACAAGTCAGTTGACAAATTTGGTGAAAATGTGGAACTGAACGACGATGTTTATAAGAGTGTGACAGAGTTGAATCGTGATGACATTTTAAATTTGGAGTTTGGAAGTGAAAATGAGGCTATAGATTTTTACAGCAAATATGCCATGTGTCATGGATTTGTTGTTAGAAAAGATGATGTGATCAGAGATTTGAAGGGAAATGTTGTCATGCGCCAATTAGTATGCAATAGAGCTGGGTTGAGAAACAGAAAACACATTGAGAGGGTTGATAGAATAAGAGATCATAGACCAATCACACGTACTAACTGTGAAGCTAAGTTTAGGGTCCATTTTGATTACCGAACATTGAAATGGAGGGTTGCATCGTTTGAGGATACACATAATCATGTGCTTACACCATGTGAACAAGTCCACCTTCTTCCTGCGTATCGTAGGTTGACTTATGCAGATGAAGCTCAGGTGGACAGCTTGCATCTTTATGGTGTAAGGACATGTCATATAATGGGTTTCATGCTAGCTCAAAAAGGTGGATATGCAGACTTAGGATTCTGCAAGAAGGATCTATATAATCATCTTGATAAGCAGAGGCGTGCCAAATTAGATGATGGTGATGCATTTGCTGCACTGAGCTACTTGCAAGCAAAGGCAGATAATGATCCGATGCTATTTGCAAAATTTACAACCACTGAAGATGGGAGATTGCAAAATTTGTTTTGGTCAGATGGTTGTAGCAGGAGTGACTTTGAATGCTTTGGTGATGTGCTTGCATTTGATACGACTTATAAGAAGAACAAGTACAACAAGCCATTGAATGATAAACGATGTAATGGTGATGAATTGAATACGAAGGGGAAGGAAATTAAAATGACTCCTTCAACCCAAAATTCTGTAAAGGATGACGCCTTGGATTCCAATTTGTACCTCAATATCCCAGACTCCCTGTATTCCCTCAATATCACCATGTTCCGGTTTTTCCCCATTTTAGAGGAATTTATCCTGAGTATTTTTCTGGAGTTGATAGTTATCGTACCACAACGAGTATGA 1122 0.3877 MDTIVEESFVDLNDDGDLNMSPCDGSDKSVDKFGENVELNDDVYKSVTELNRDDILNLEFGSENEAIDFYSKYAMCHGFVVRKDDVIRDLKGNVVMRQLVCNRAGLRNRKHIERVDRIRDHRPITRTNCEAKFRVHFDYRTLKWRVASFEDTHNHVLTPCEQVHLLPAYRRLTYADEAQVDSLHLYGVRTCHIMGFMLAQKGGYADLGFCKKDLYNHLDKQRRAKLDDGDAFAALSYLQAKADNDPMLFAKFTTTEDGRLQNLFWSDGCSRSDFECFGDVLAFDTTYKKNKYNKPLNDKRCNGDELNTKGKEIKMTPSTQNSVKDDALDSNLYLNIPDSLYSLNITMFRFFPILEEFILSIFLELIVIVPQRV* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00366 373 PANTHER OS01G0519700 PROTEIN 53 285 - -
Rops11g00366 373 Pfam FAR1 DNA-binding domain 68 158 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00366 Rops-Chr11 4991607 4994611 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops11g00366 FAR1 7.6e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00366 - - ccaj:109792835 380.178