Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00365 ATGCTTGACAAGCTTGGTGGTGCATTTGCGCCCAAGCCATCATCTGGACCCCGCAAGTCAAGGGAGTGCCTGCCTTTGATCCTCATCCTGCGAAACAGATTGAAGTATGCACTAACATGCAGAGAAGTTATTGCCATCTTGATGCAGCGCCATGTTCTTGTTGATGGCTTGTTAGGAACACCACCGGCAGCCGTTGCTGGTGGATCATCTGTACCCCCACCACAGATTGCTAAAACACCTGCATCACAATCTGCGTTCATTATAAGGCCATGCTTCCAAGAGGAGAGTGGTGGTGAGGCAAAGCCGAAGGATGGTCCAAAACGTTGCAGCAGGTGCAATAAGCGAGTTGGTTTGACAGGGTTTAATTGTCGATGTGGTAACCTTTTCTGTGCTGCACATCGCTACTCAGACAAGCATAATTGCCCATTTGATTACCGCACTACTGCACGGGATGCCATAGCTAAAGCAAACCCAGTTGTCAAGGCTGAGAAGCTTGATAAGATCTAA 507 0.4872 MLDKLGGAFAPKPSSGPRKSRECLPLILILRNRLKYALTCREVIAILMQRHVLVDGLLGTPPAAVAGGSSVPPPQIAKTPASQSAFIIRPCFQEESGGEAKPKDGPKRCSRCNKRVGLTGFNCRCGNLFCAAHRYSDKHNCPFDYRTTARDAIAKANPVVKAEKLDKI* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00365 168 Gene3D - 1 73 IPR036986 GO:0003723
Rops11g00365 168 FunFam Zinc finger AN1-type containing 6 83 164 - -
Rops11g00365 168 MobiDBLite consensus disorder prediction 1 20 - -
Rops11g00365 168 SUPERFAMILY AN1-like Zinc finger 95 163 IPR035896 -
Rops11g00365 168 Gene3D - 89 164 IPR035896 -
Rops11g00365 168 PANTHER AN1-TYPE ZINC FINGER PROTEIN 94 168 - -
Rops11g00365 168 Pfam AN1-like Zinc finger 109 145 IPR000058 GO:0008270
Rops11g00365 168 ProSiteProfiles Zinc finger AN1-type profile. 103 149 IPR000058 GO:0008270
Rops11g00365 168 SMART AN1_Zf_4 109 146 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00365 Rops-Chr11 4986164 4987036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00365 1 71 Cytoplasmic Ribosomal Protein Gene Family AT2G17360 74.648 1.05e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00365 - - gmx:100500070 153.295