Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00351 ATGGAGAACTATGCAGCATACCAAACCTACCCAGATTCAGGTGAGTCATCTCCACGTTCTAGAGAGATCGATTTCGAGAATCCACAACCATGGGATGATCCAAACTACAAGGTCAAGTTCATGTGCAGTTATGGCGGCAAGATCCAACCACGCACCCACGACAACCAACTCTCTTACGTCGGCGGCGAAACCAAGATCCTCGCCGTCGATCGTAACATCAAGTTCACCACCATGATTTCCAAACTCTCCGCTCTCTACAACGCTGAGGTTTCCTTTAAGTACCAACTACCTGGTGAGGACCTCGATGCTCTTATTTCTGTTACTAACGATGATGATCTTGATCACATGATGCACGAGTATGATCGACTCTTCCGTGCTTCCTCTAGACCCGCACGCATGCGATTATTCCTCTTTACCGTTGACCAGGTCAAACCTTCCTCCACAAACAACGTTGATTTCCTCTTCGATCTTGAAAAGCCGGTCGTTGTTCCTCCTCCTCAGCCACTGCCTGTGGCCGTGAAATTTCATGATCCGGTGCCGGAACCTGTGGCGCCGCCTACTCCGCCGCCTGCTCATCGGGTTGTAGGTTCGGATCCGAACCTGAACCACCCGCTCGAGATTCAGAGGGAGTTGCAGAGGATGCAAATCGCGGAGAACGAACAAGCTGCGTATCGGAGGAAAAGCGAAGAGAATCTCGTCGGGAATTACCCGGCCGGTGGAGATTATTATGTTCAGAAGGTACCGGAGAAATTCGCTCCGTCTAATTTTCCGGCTAGTGCTCCGCAGCAGCAGCATCAGCATCAGCATCAGGCGGGTTATTGGCAGGAAAAGCCTGTTTCCGGCGAGGTTTATCAGCCGACGATGTCAGGTGTTCACGGAGGAGGTGACCAGCCGGTTTATGTATTTCCGGCGCCGGGAACGTTCTATCATGCGCCGGTGGTGCGTCCACCTCCGGCGACTCAAGGGTACTACACGGTGCAACGGATGCCTTCTGATGCTTACCGTGAACAGCCTATATACGGCGGAGTACCACCTCCGAAAGCGCAGTTTTCGTCTGCGGTTCCGGTGACCGTGGCACCGGCGCAGCCGGTTAAAGCTCCTGCTTATACCGAAGGAATCAACGTGGTTCGACCGGCTGGGATACCGGATAATACGGGGGCAGCGTACGCACAGGTGGCGTACGATAGCGCAAGTGGGAGACAGGTTTACTATAATGCGCCGGGTGGCGTAGTGCACGCTCCGCCTTACCAAGGAGTTGCTGCGCCGGTCACCACTGATATGAGAACAGCAACAAGCAAGATTTCTCAAGGTTCAGTGTGA 1320 0.5341 MENYAAYQTYPDSGESSPRSREIDFENPQPWDDPNYKVKFMCSYGGKIQPRTHDNQLSYVGGETKILAVDRNIKFTTMISKLSALYNAEVSFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLFRASSRPARMRLFLFTVDQVKPSSTNNVDFLFDLEKPVVVPPPQPLPVAVKFHDPVPEPVAPPTPPPAHRVVGSDPNLNHPLEIQRELQRMQIAENEQAAYRRKSEENLVGNYPAGGDYYVQKVPEKFAPSNFPASAPQQQHQHQHQAGYWQEKPVSGEVYQPTMSGVHGGGDQPVYVFPAPGTFYHAPVVRPPPATQGYYTVQRMPSDAYREQPIYGGVPPPKAQFSSAVPVTVAPAQPVKAPAYTEGINVVRPAGIPDNTGAAYAQVAYDSASGRQVYYNAPGGVVHAPPYQGVAAPVTTDMRTATSKISQGSV* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00351 439 Pfam PB1 domain 53 138 IPR000270 GO:0005515
Rops11g00351 439 PANTHER OS05G0427100 PROTEIN-RELATED 10 287 - -
Rops11g00351 439 SMART PB1_new 52 140 IPR000270 GO:0005515
Rops11g00351 439 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 57 140 - -
Rops11g00351 439 MobiDBLite consensus disorder prediction 1 29 - -
Rops11g00351 439 SUPERFAMILY CAD & PB1 domains 53 147 - -
Rops11g00351 439 Gene3D - 58 141 - -
Rops11g00351 439 Coils Coil 207 227 - -
Rops11g00351 439 CDD PB1_UP2 41 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00351 Rops-Chr11 4845402 4847050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00351 32 140 MAP Kinase Kinase Kinase AT5G57610 48.624 2.51e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00351 - - gmx:100801566 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00351 11 4845402 4847050 Rops11g00351 11 4845402 4847050 ECH
Rops2g01884 2 29623015 29624537 Rops11g00351 11 4845402 4847050 PCT