Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00344 ATGGGTGAAGGACTTTCTGGTTTGGGTATTAAAGAATTACAAAATCTGGAAAGCCAACTGGAGATGAGTTTAAAGGGTGTTCGCATTCAAAAGGATCAAATTTTGACTAATGAGATTAAAGAACTACACCAAAAGGGAACTCTCATTCATCAAGAAAATGTAGAACTTTATAAAAAGATGGACCTCATCCAAAAAGAAAATGCAGAGCTACAAAAGAAGGTTTATGAAGCAAGAGGAACAAATGAAGAAAATGCAGCATCCAATCCTTCATGCACTATCAGATATGGATATGATGATTTACATGCACCTATCAGTCTCCAGCTAAGCCAGCCACAGCCTCAATACAGTGAACCACCAGCTAAAGCAATGAAACTGGGATGTATCTGGCGTGCAGTAGAACGATCTGAAGGAATATTGAAGTCTATGTCTATAATCCCATGGATCAACCCTGGATTAAAGCTCTATTCAACAGAAAAGCAAAAAGTTCAAGTGGTTGCAGTCAAGTGA 507 0.3826 MGEGLSGLGIKELQNLESQLEMSLKGVRIQKDQILTNEIKELHQKGTLIHQENVELYKKMDLIQKENAELQKKVYEARGTNEENAASNPSCTIRYGYDDLHAPISLQLSQPQPQYSEPPAKAMKLGCIWRAVERSEGILKSMSIIPWINPGLKLYSTEKQKVQVVAVK* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00344 168 Pfam K-box region 1 60 IPR002487 GO:0003700|GO:0005634|GO:0006355
Rops11g00344 168 Coils Coil 53 73 - -
Rops11g00344 168 ProSiteProfiles K-box domain profile. 1 66 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00344 Rops-Chr11 4688988 4691509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00344 1 128 MADS-box Gene Family AT3G57230 44.275 6.31e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00344 K09264 - gmx:100808145 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00344 11 4688988 4691509 Rops11g00344 11 4688988 4691509 ECH