Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00343 ATGAGAAAAGGCCATGAAAAGAAACTGAAAGGTGAAACAGAGAGAAAGAAAACCACACAACAAAGGAAAATTATGAGTTCTGAAGGTGTTGTTGAAAATTGCCTAGGATGGGCAGCAAGAGATGCATCTGGAGTTCTGTCGCCTTACAAATTCAGCCGCAGGGCTCTTGGGAACGAAGATGTTTATATTAAAATCACACACTGTGGTATTTGTTATGCTGATGTAGTTTGGACAAGGAATCAACATGGAGACTCAATGTATCCTGTTGTGCCTGGACATGAGATTGCTGGGATTGTGACAATGGTTGGCTCCAATGTCCGCCGTTTTAATGTTGGTGACCATGTTGGTGTGGGGACTTATGTCAACTCATGCAGGGATTGTGAGTATTGTAATGACAGACTAGAACCTTATTGTATCAAGGGGTCAGTTTACACTTTTAATGGTGTTGATCATGATGGTACAATCACAAAAGGAGGATACTCCAGTTCCATTGTAGTCGATGAAAGGTATTGCTTCATGATACCCAAAAGCTACCCTTTGGCTTCAGCAGCCCCTTTGCTTTGTGCGGGAATTACTGTTTATTCTCCCATGATGTTCCACAAGATGAATCAACCTGGTAAATCTCTAGGAGTGATTGGTCTTGGTGGCCTCGGTCACATGGCAGTGAAATTTGGAAAGGCATTTGGTTTGAATGTGACAGTTTTCAGCACTAGCATATCCAAGAAAGAGGAGGCACTGAGCCTGCTTGGTGCAGACAAATTTGTTGTTTCGTCTAATCAAGAGGAGATGATGGCGCTGGCTAAATCATTGGACTTTATAATTGACACAGCATCTGGAGATCACCCGTTTGATCCTTACATGTCACTATTGAAGATATCTGGTGTTCTAGTCCTAGTTGGGTTCCCAAGTGAAGTCAAATTCAGCCCTGCAAGCCTTAATCTAGGAATGAGAACTGTCTCCGGAAGTATTGTAGGTGGTACAAAAGAAATTCAGGAGATGATTGACTTCTGTGCTGCAAAGGGGATTCACCCTGAAATAGAAGTGATTCCAATCGAGTATGCAAATGAAGCTCTTGAGAGGGTCATAAATAAGGATGTGAAGTATCGGTTTGTAATAGATATTGAGAACTCCCTTAAACAATACTAG 1146 0.4197 MRKGHEKKLKGETERKKTTQQRKIMSSEGVVENCLGWAARDASGVLSPYKFSRRALGNEDVYIKITHCGICYADVVWTRNQHGDSMYPVVPGHEIAGIVTMVGSNVRRFNVGDHVGVGTYVNSCRDCEYCNDRLEPYCIKGSVYTFNGVDHDGTITKGGYSSSIVVDERYCFMIPKSYPLASAAPLLCAGITVYSPMMFHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVFSTSISKKEEALSLLGADKFVVSSNQEEMMALAKSLDFIIDTASGDHPFDPYMSLLKISGVLVLVGFPSEVKFSPASLNLGMRTVSGSIVGGTKEIQEMIDFCAAKGIHPEIEVIPIEYANEALERVINKDVKYRFVIDIENSLKQY* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00343 381 FunFam probable cinnamyl alcohol dehydrogenase 37 204 - -
Rops11g00343 381 Pfam Zinc-binding dehydrogenase 216 338 IPR013149 -
Rops11g00343 381 FunFam Putative cinnamyl alcohol dehydrogenase 6 345 374 - -
Rops11g00343 381 CDD CAD1 36 373 IPR047109 GO:0016616
Rops11g00343 381 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 209 236 IPR029752 -
Rops11g00343 381 SMART PKS_ER_names_mod 44 372 IPR020843 GO:0016491
Rops11g00343 381 MobiDBLite consensus disorder prediction 7 22 - -
Rops11g00343 381 SUPERFAMILY GroES-like 40 207 IPR011032 -
Rops11g00343 381 Gene3D - 37 374 - -
Rops11g00343 381 Pfam Alcohol dehydrogenase GroES-like domain 59 172 IPR013154 -
Rops11g00343 381 Gene3D - 189 344 - -
Rops11g00343 381 FunFam Cinnamyl alcohol dehydrogenase 189 344 - -
Rops11g00343 381 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 179 342 IPR036291 -
Rops11g00343 381 MobiDBLite consensus disorder prediction 1 23 - -
Rops11g00343 381 PANTHER ALDEHYDE REDUCTASE 32 377 IPR047109 GO:0016616
Rops11g00343 381 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 92 106 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00343 Rops-Chr11 4634449 4640135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00343 26 379 Monolignol Biosynthesis Gene Families AT1G72680 74.294 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00343 K00083 - gmx:100807617 634.024