Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00313 ATGGAGGGTCAGGGTCACGGCAACAGAGCCGAAGCTGAACGGTGGTTATACACTGCTAACAAACTCCTCACCGCACGTGACTTGCACGGGGCTCGCTCCTTCGCTATTCGGGCCCGAGAATCCGACCCGAGATTTGAAGCCACGGAGCTTCTCCTCACAGTGATAGACACACTGCTTGCTGGTGACACCCGAATCAAGGACCACCACCTTGACTACTATGCTATCCTCCAAGTTCTTCCTTACACCGATAACATCGACTACATCGCCGCCCAGTACCACCGTCTCGCCACCCTCCTCGACCCTCATCGCAACCCCTTCGCCTTCTCCGCTCACGCTTTCAACCTCCTCCACGATGCTTGGTCCCTTCTCTCCAACCCTTCCAAAAAAGCCTTCTACGACAACCAACTTAGGTTACTTACTCAACCACCACCACCACCACCACCTCCTCCTGTTGAGGAAGAAGACAATGCCGCCGCCGACACTGACTGCCGGAGTTTCTGGACGGCTTGTCCTTATTGTTACGTTATGTATGAGTACCCTAAGGTGTATGAGGATTGTACTCTTCGGTGTCAGAGTTGTCGGAGGGGTTTTCATGCGGTGGTTGTACGGTCACCGCCGTTGACTGGGGATGACGAGTCTTCATTTTGCAGTTGGGGTTTTTTCCCTTTAGGGTATTCTGGTAATTTTAAGGATATAAGTGGGTCTTCTTCAAAGTGGAACCCTTTTACTCCTTTGTTTCCTTGTCCTTTGAAGGGAGGTTCTTCCAATAAAGGGTCTCGGAAGGGGCCCTGGGTTTATTACGATGATGAGGAGGCTGCGGCGTTTGTTGAGATTTCCGACACGACGGAGGAGGATTCCGATGATGGGGACTGGCGGGGTGGTGGGAATAAGAAGGGGAGAAAGAGGGGGAGGAGGAAAGGGTCTTCTTCTAATGCTGTTTTTGGTGTTAGAAGGGCACAGGTTAGAAAGGGGTCTTCTAAAGCCAATGTGGATGGTAATGATGAGGTTGTTGATGGTGCTTCTGCGCCTGTGACGGAATCTGGTAAGAAAGGTGCTGCCTTGGGTGGTTCTAGGAGGAGGGGTGCGGGGAACTTGGGGAAGTTGGATTTGAACGTGGAGTTTAGTAATGAGGTGGAAGAGCCTGTACCTGGTGTGAGTCAAGGGAATGAGAATGGGGCTGGTAATGCCGAGGATAATATAGAAGGGATTGGGTTTTTTGAGGGGCTTGATGAGTTCCTTAGTAGCTTACCTATTCTCAATGTTGTTGCAGATGATAAGGTTAAGGGTCATTAG 1293 0.5097 MEGQGHGNRAEAERWLYTANKLLTARDLHGARSFAIRARESDPRFEATELLLTVIDTLLAGDTRIKDHHLDYYAILQVLPYTDNIDYIAAQYHRLATLLDPHRNPFAFSAHAFNLLHDAWSLLSNPSKKAFYDNQLRLLTQPPPPPPPPPVEEEDNAAADTDCRSFWTACPYCYVMYEYPKVYEDCTLRCQSCRRGFHAVVVRSPPLTGDDESSFCSWGFFPLGYSGNFKDISGSSSKWNPFTPLFPCPLKGGSSNKGSRKGPWVYYDDEEAAAFVEISDTTEEDSDDGDWRGGGNKKGRKRGRRKGSSSNAVFGVRRAQVRKGSSKANVDGNDEVVDGASAPVTESGKKGAALGGSRRRGAGNLGKLDLNVEFSNEVEEPVPGVSQGNENGAGNAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00313 430 ProSiteProfiles dnaJ domain profile. 71 136 IPR001623 -
Rops11g00313 430 Pfam DnaJ domain 71 133 IPR001623 -
Rops11g00313 430 SMART dnaj_3 70 128 IPR001623 -
Rops11g00313 430 MobiDBLite consensus disorder prediction 279 360 - -
Rops11g00313 430 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Rops11g00313 430 Gene3D DnaJ domain 66 141 IPR036869 -
Rops11g00313 430 MobiDBLite consensus disorder prediction 139 153 - -
Rops11g00313 430 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 324 - -
Rops11g00313 430 MobiDBLite consensus disorder prediction 137 156 - -
Rops11g00313 430 CDD DnaJ 71 125 IPR001623 -
Rops11g00313 430 SUPERFAMILY Chaperone J-domain 67 137 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00313 Rops-Chr11 4173535 4174827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00313 11 429 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 42.952 9.00e-108 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00313 - - lja:Lj6g3v2193500.1 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01818 2 28090108 28091949 Rops11g00313 11 4173535 4174827 PCT