Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00308 ATGGTTAAGGCTCATAAGTGTTGGCCTTGCCCACAGCATGTGGCTTGGCCATCACTTAATTTAAATTGTGCCTGCACATTGCTGGATCCCGGTTCGTGTGGTCATTCAGCATATCTGAATCCTAGTACCTGCACTTTTCCTGCTGTCAGTGCATTTCCAGGGTTCACAGCTCCTGCTACCCCAAGCCTGAAGACTGAGCAGACCAATGAAGTGCAAGGATTCCTTCCGTATCCCAATTCAGAACCATGTTCGAAAGAAACACATATTGGAGGGGCCATGCAAAATGCAAACCCTGCATCTTTGCAGAAGAAGTTACTTATTTTTGACCACTCTGGTAATAAGACAAGGTTGTTTTACAGTCCTGTCTTCCCTCTTGTACAGAGTCCAATTGTTACTGCTACACAATTTGCTCAAGCTTATGATGTAAATGTGGAAGGACAGGGAACTAATATTGGTCTAAAGCATTTACCGGAATACAGTTTACCCGAAGAGTCAGATAAGGATAATATAGTTCATGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCATTGCTTTATTCTGATGATTCTGATTCCGGTTCTGGTGATGATGATGAGGTAACAAGTACAGGCCATTCTCCATTGGCTACTAAAAGGACTTATGTGATGCAAGAACAGTTTGAGGATACAAAGGAGGAGGTTGCTAGCTCTGATTGGCCAAACAAAAGGCATAAGTTAATTGATGGTGGGTACAAAAAATCACCACCACCTGTGGACAGTGCTAGTTCAGTTAGATTAAATGAAACTTGTGAGTATGTCAGTGATGCTGAATCGAAGTGTTCTAGTGGCCAAGTATATTCTGCCAGGCAAACTGAAGAAGATTATTCAATGGTGGGTGATATTCAGTTGAAAAAAGATAAAATCCGTGAATCATTAAGAGCTCTTGAAAACTTAATTCCCAGAGCAAAAGGAAAACATCCGCTGTTAGTCATTGATGGAACTATTGATTACTTGAAATCTTTGATGTCCCAAACTGGTACACTTGGGGTGAAATATCACTAA 1050 0.4095 MVKAHKCWPCPQHVAWPSLNLNCACTLLDPGSCGHSAYLNPSTCTFPAVSAFPGFTAPATPSLKTEQTNEVQGFLPYPNSEPCSKETHIGGAMQNANPASLQKKLLIFDHSGNKTRLFYSPVFPLVQSPIVTATQFAQAYDVNVEGQGTNIGLKHLPEYSLPEESDKDNIVHEESEMHEDTEEINALLYSDDSDSGSGDDDEVTSTGHSPLATKRTYVMQEQFEDTKEEVASSDWPNKRHKLIDGGYKKSPPPVDSASSVRLNETCEYVSDAESKCSSGQVYSARQTEEDYSMVGDIQLKKDKIRESLRALENLIPRAKGKHPLLVIDGTIDYLKSLMSQTGTLGVKYH* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00308 349 MobiDBLite consensus disorder prediction 200 216 - -
Rops11g00308 349 PANTHER TRANSCRIPTION FACTOR BHLH145 8 347 IPR037546 -
Rops11g00308 349 MobiDBLite consensus disorder prediction 189 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00308 Rops-Chr11 4094567 4098171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00308 39 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 32.827 2.22e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00308 - - gmx:100778385 498.819