Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00296 ATGGAGAGCTTTGCACTTCACTCGCTCTCCACCTCAACCTCCTTCTCTCGCTCTTCTTCCTTACCCCGTCATCGTTCTCGACCCATCTCCACCAGATCCCAATTGTCTCTTCCATTCAATCCCTCTTCACGTTCAACCCCATCTCTCAAATCACCCTTCATCTCTCAAGCCTTCCCCTTTCCTTCCAAAGCTTCCACCTTTAATCCTTTCTCAAAACCCCACACCCCAATTCAAGCTTCTTCTTCTTCATCTCCTCCACCTTCAAAAACCCCACGTGTTCTTCAGGGTGCAAAGCCCATTCCTTTTGTTATATCCATATGTATAGGTCTCATTGTTCGGTTTCTGGTTCCTAAACCAGTGGAAGTGACCCTTCAGGCATGGCAGTTGCTCTCAATTTTCCTTTCAACCATCACGGGCCTTGTTCTAAGCCCGTTGCCGGTTGGAGCTTGGGCTTTTCTGGGCTTGACAACCTCTTTGGTGACTAATACTCTTACCTTTTCAGCTGCCTTCAGTGCCTTCACGAACGAGGTGATTTGGTTGATTGTGATCTCGTTCTTCTTTGCACGTGGGTTTGTGAAGACTGGGTTGGGGGATAGGATCGCAACTTACTTTGTGAAATGGATGGGAAAGAGCACTTTGGGGTTGTCTTATGGGCTTACATTCAGTGAGGTGCTTATTGCACCTGCGATGCCAAGCACCACTGCAAGGGCTGGTGGCGTGTTCTTGCCAATTATTAAGTCACTTTCACTCTCTGCAGGGAGTGAACCTGGCAATCCCACGGCTAAGAGGTTGGGGGCTTATCTCATTCAGAACCAATTTCAGTCTGCTGGTAACTCCAGTGCTCTATTCCTAACTGCTGCGGCCCAGAATCTGCTGTGTATCAAATTAGCAGAGGAGCTTGGGTTGATAGTTTCAAACCCATGGGTAACTTGGTTCAAGGCAGCCAGTGTACCTGCATTAATTTGTCTTCTTGTTACACCATTAATTTTATACAAGATTTATCCCCCTGAAATTAAAGACACACCAGAGGCACCTGCCTTGGCTGCAAAGAAACTGGAAAGTATGGGCCCTGTCACTCGAAATGAATGGATTATGGTTGCTACAATGCTTCTTGCAGTTTCTTTGTGGATCTTTGGAGAGTCTCTTGGCATAGCAAGTGCTGTAGCTGCAATGATTGGTTTATCAATACTCCTTGTATTGGGAGTCCTTGACTGGGATGATTGCTTGAATGAAAAATCAGCATGGGATACCTTGTCTTGGTTTGCCGTTCTAGTAGGTATGGCAGGCCAGTTGACAAACCTTGGTATTGTGGGCTGGATGTCTGATTGTGTGGCCCACGTCCTTCGGTCATTCTCTTTGAGCTGGCCAGCTGCACTAGCTGTTCTTCAGGCAGCTTATTTCTTCATCCACTACCTTTTTGCAAGTCAGACTGGACATGTGGGGGCTTTATACTCTGCATTTCTTGCTATGCATAGGGCAGCTGGTGTTCCTGCTCTTCTGGCAGCACTTGCTTTAGGTTACAATACAAATCTTTTTGGTGCAATAACACACTACAGTAGTGGTCAGGCTGCTGTATACTATGGAGCTGGTTACGTAGACCTTCCAGATATATTCAGAGTTGGGTTCATCATGGCCGTTGTTAATGCTATCATCTGGGGAGGTGTTGGCTCTCTATGGTGGAAATTTTTGGGCTTGTATTGA 1701 0.4656 MESFALHSLSTSTSFSRSSSLPRHRSRPISTRSQLSLPFNPSSRSTPSLKSPFISQAFPFPSKASTFNPFSKPHTPIQASSSSSPPPSKTPRVLQGAKPIPFVISICIGLIVRFLVPKPVEVTLQAWQLLSIFLSTITGLVLSPLPVGAWAFLGLTTSLVTNTLTFSAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEVLIAPAMPSTTARAGGVFLPIIKSLSLSAGSEPGNPTAKRLGAYLIQNQFQSAGNSSALFLTAAAQNLLCIKLAEELGLIVSNPWVTWFKAASVPALICLLVTPLILYKIYPPEIKDTPEAPALAAKKLESMGPVTRNEWIMVATMLLAVSLWIFGESLGIASAVAAMIGLSILLVLGVLDWDDCLNEKSAWDTLSWFAVLVGMAGQLTNLGIVGWMSDCVAHVLRSFSLSWPAALAVLQAAYFFIHYLFASQTGHVGALYSAFLAMHRAAGVPALLAALALGYNTNLFGAITHYSSGQAAVYYGAGYVDLPDIFRVGFIMAVVNAIIWGGVGSLWWKFLGLY* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00296 566 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 70 566 IPR030676 -
Rops11g00296 566 MobiDBLite consensus disorder prediction 1 50 - -
Rops11g00296 566 NCBIfam DASS family sodium-coupled anion symporter 118 560 IPR001898 GO:0016020|GO:0022857|GO:0055085
Rops11g00296 566 MobiDBLite consensus disorder prediction 73 90 - -
Rops11g00296 566 Pfam Sodium:sulfate symporter transmembrane region 103 565 IPR001898 GO:0016020|GO:0022857|GO:0055085
Rops11g00296 566 MobiDBLite consensus disorder prediction 73 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00296 Rops-Chr11 3958901 3962924 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00296 1 566 Antiporters AT5G64290 73.519 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00296 - - gmx:100776794 897.886