Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00295 ATGGCAGAATATTTTTCTCTGCACTCAGGCTGGGCTTGCTCTCAGCTTCTGATTTTGCTAGCTCTCTTTGCACACGCAGATTGTGGCAACATTGTCAGAACTCTCCCTGGCTTTTCTGGTGAATTACCATTCACACTTGAAACAGGATACATAGGAGTGGAGGATTCAGAGCTATTCTATCTTTTTGTTGAGTCAACTGGGAAACCAAGGACTGACCCTCTTCTGCTATACTTAGTCGGAGGTCCTGGCTGTTCTGCTTTAAATGGTTTTTTCTATCAAGTTGGTCCACTGGAATTCAATGGGACTGATTATACTGGGGGTGTACCACAATTAATCTTAAGGCCTCACCCATGGACAAAAACTGCTAGCATTATATTTCTAGATGCACCTGTTGGTACTGGATACTCATACTCTACAAACCCAGAAAGTTTGGTTGTATCTGACACGATGTCAGTAAGACAAACTTACAAATTCTTGAGAGAGTGGTTGATTGAACATCCTCAATATCTTTCAAATCGAGTCTTTGTTGCCAGTGACTCATATAGCGGTATACTTGCACCAGTAATTTCAAAGCATATATTAGATGGGAATGCAGCTGGACTAAAGCCATACATACACTTAATAGGAATGATAGGTGGGTCTCCCCATACAAATGAAGGACTCGAAAAGAATTCAATAATTATTATGGCTCACCGATTGGCACTTATATCAGATAGACTTTATGAGGAAGCCAAGGAGAGTTGTGAAGGATGGTATGTTAATGTAGACCCCTCAAATACAAAATGTGTGGAAGCACTTCAAAAGATTGATCAGTTGCTTGCTGATATTTATGATGAAGATGTTTTGGAATCCAAATGTGCAACACTGTCACCAAAACCAGATGATACACAAACTCGAAGAGCTCTGAAAGGAAAACCAAGAGGTTTCCATTGGCAATCTCTGAAACAACACCATCAGGAATGGTGGTGCAAGAATTTTATTTATTTACTTTCTTTCATATGGGCAAACGATAAGAAAGTTCAAGAAGCCCTTCATGTTCGAGAGGGAACAGTAAAACAATGGTACAGGTGCAACTTAGTCTTACAGGACCTTTACCACTATGATATTTCTGATGCCGTTGATTATCAGAAGAACCTTACTCAGACAGGCTTACAAGTCTTGCTCTATGATGGTGATCACGATCTCGTGGTCTCACATGTATCTACAGAAGAATGGATAAGGAGCCTTTTCTTGACTGTTGATGATGCATGGCGACCTTGGTTTGTTGATGGACAAGTTGCAGGGTACCAACTTCTTTATTCGAATAATAGATACCGTTTGACTTATGCAACACTGAAGGGATCTGGGCATTCTCCTACTGAGTACAAAAACAGGGAATGCTTCGAAATGTTTGAAAGATGGATCCATTTTTATCCCCTTTAG 1422 0.4037 MAEYFSLHSGWACSQLLILLALFAHADCGNIVRTLPGFSGELPFTLETGYIGVEDSELFYLFVESTGKPRTDPLLLYLVGGPGCSALNGFFYQVGPLEFNGTDYTGGVPQLILRPHPWTKTASIIFLDAPVGTGYSYSTNPESLVVSDTMSVRQTYKFLREWLIEHPQYLSNRVFVASDSYSGILAPVISKHILDGNAAGLKPYIHLIGMIGGSPHTNEGLEKNSIIIMAHRLALISDRLYEEAKESCEGWYVNVDPSNTKCVEALQKIDQLLADIYDEDVLESKCATLSPKPDDTQTRRALKGKPRGFHWQSLKQHHQEWWCKNFIYLLSFIWANDKKVQEALHVREGTVKQWYRCNLVLQDLYHYDISDAVDYQKNLTQTGLQVLLYDGDHDLVVSHVSTEEWIRSLFLTVDDAWRPWFVDGQVAGYQLLYSNNRYRLTYATLKGSGHSPTEYKNRECFEMFERWIHFYPL* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00295 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Rops11g00295 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Rops11g00295 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 440 453 IPR001563 GO:0004185|GO:0006508
Rops11g00295 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Rops11g00295 473 FunFam Serine carboxypeptidase-like 19 25 292 - -
Rops11g00295 473 FunFam Carboxypeptidase 323 473 - -
Rops11g00295 473 SUPERFAMILY alpha/beta-Hydrolases 32 469 IPR029058 -
Rops11g00295 473 Gene3D - 330 472 - -
Rops11g00295 473 Gene3D alpha/beta hydrolase 27 293 IPR029058 -
Rops11g00295 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 455 IPR001563 GO:0004185|GO:0006508
Rops11g00295 473 Pfam Serine carboxypeptidase 36 469 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00295 Rops-Chr11 3953096 3957129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00295 25 53 Calmodulin-binding Proteins AT2G22960 68.966 6.63e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00295 K16296 - rcu:8276886 577.4