Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00289 ATGTTCTCTGGTCCTCTCTCATCAAAAGAAGGTAAAAGAAAAAAAAAGAGGTTGAAGGAAAGAAGTGATACAAAGGAATATCCTGTTGATATATCGTTACCTGACATAAACAACGGTGTATATAGGACTGATGAGTTTAGGATGTTTAGTTTCAAGTACCGAACAAGGCTTTGCAAAGATGAGATTGGCTGCTCTAGAAAAGTTTACTTCTTTGCTCATAAACTTGAAGAGCTACGCCCGATTTATGCTTGCACTGGGTCAGCTATGCCTTCACCAAAATTTTGTTCAGCTAGTGGACTTGACATGACAACGATGAGTCCATTGGTTCTTAGTTCCTCATCTTTATCATCTCCAAAGAGTGGAAGCTAG 369 0.3902 MFSGPLSSKEGKRKKKRLKERSDTKEYPVDISLPDINNGVYRTDEFRMFSFKYRTRLCKDEIGCSRKVYFFAHKLEELRPIYACTGSAMPSPKFCSASGLDMTTMSPLVLSSSSLSSPKSGS* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00289 122 PANTHER UNKEMPT FAMILY MEMBER 52 118 IPR045234 -
Rops11g00289 122 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00289 Rops-Chr11 3911306 3911880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00289 22 79 C2H2 Transcription Factor Family AT5G12850 50.000 3.66e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00289 - - gmx:100783376 94.3597