Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00286 ATGAGTTATTTTCTTTGTCTACCTCTGGGGACAAAAGCCAATGAAACTTACGATGGCTCAAGACAAGGGCAAAATAGCTTGGTGGGAGTCAAATGTTCAGTGCAAATAAGCAGAGAAGAAAGTGTTATGATTGGGGTGCCAGAGCAGGGTATTTGTTTGACATGGGAAGACTTGTGTGTGAGTGTCTCAAGTGGAAAGGGTGGCAGCAAGGGAATCCTTGAGGGCCTAACGGGTTATGCCAAGCCAGGACAGTTGTTGGCTATAATGGGTCCTTCTGGTTGTGGCAAGACCACACTTCTTGATGCCTTAGCAGGAAGGTTGAGTTCAAATGCGAAACAGACAGGGAATATCCTAATTAATGGCCACAAACAAGCACTTGCTTATGGAACATCAGCATATCTAACACAAGATGAAGCAATATTGACCACATTAACTATTGGAGAAGCAGTGTACTACTCAGCTCAGCTCCAATTGCCTGATTCAATGTCCAAGTCAGAAAAAACGGAAAGAGCAAACTTCACAATCAAAGAAATGGGTCTGCAAGATGCCATTCATGCAAGGATTGGAGGGGGTGGTTCTAAAGGCATTAGTGGGGGGCAGAAAAGGAGAGTTAGCATTTGCATTGAGATTCTAACACGTCCTAGCCTTCTATTCCTTGATGAACCAACTAGTGGACTTGATAGCGCAGCTTCTTATTATGTTATGAGCAGAATTGCAAGATTAAATAAAAAGGATGGCATTCCAAGGACAATTGTTGCATCAATCCATCAACCTAGCAATGAAGTCTTTCAACTTTTTCACAACCTTTGTCTTCTGTCTTCTGGTAAAGTAGTATACTTTGGCCCTGCTCCTGCTGCAAGTAAGTTGTTTGCATCAAATGGTTTTCCCTGCCCATCTCTCCAGAACCCTTCTGATCATTTTGTGAAAACCATTAACAAGGATTTTGAGCAGGAGAACCTTGAGCAAGGATTAGCTACAGGACTTACCAAGGAAGCAGCTATTCATATGCTTGTAAAATCATACAAGTCATCTGAAATTAGTTACCAAGTTCAAACAGAAATAGTTGAAATAAGAAAAAGGGATTCTAGTGCAATGGAGAAGAAAAGCCATGCAGCCTTCTTTACTCAGTGCCTCGTTCTTACTAGAAGATCATTTGTGAATATGTATCGTGATGTAGGCTACTATTGGTTACGTTTATTTATCTATGGTGGATTGGCTATTAGTCTAGGTACTATTTTCCACGATATTGGCTCTAGCAAAGAATCAGCTCAGGCAAGAGGTTCATTACTCATGTTTGTTGCCACATTCCTGACTTTCATAACCATTGGTGGATTCCCCTCCTTTGCGGAGGAAATGAAGGTATTTGAAAGAGAAAGACTTAATGGGCATTATGGTATCACTGCATATATCATTGGACAAACATTGTCTTCTATTCCATATCTGTTATTGATATCACTGATTCCAGGAGCACTTGTTTATTACCTAACTGCACTTCACCCGGGTTGTCAACACTTCTTGTACTTTATTTCTGTGCTTTTTGTTTCTGTAATGTTGGTGGAGAGCCTTATGATGATTGTTGCTAGTGTGGTCCCCAATTTCTTGATGGGCATAATCACTGGTGCTGGAATCTTAGGGGTAATGATGTTAGATGGTGGATTCTATAGGCTGCCTAGTGATCTTCCCAAACCATTTTGGAGATACCCTTTATACTACATTTCCATCCACAAGTATGCATTTCAAGGGTTGTTTAAGAATGAGTTTGAAGGTCTAACATTAACACAAAATCAGGTTGGGGAGGCTATGAACATTAGTGGTGAAGAAATGTTGAAAACTTTATGGCAAGTGGAAATGGGTCACTCAAAGTGGGTTGATCTTTCCATCTTGCTGGGAATGATCATTCTGTATAGAATTTTGTTCTTGGTTATCATCAAGGGCATTGAGAAGGTGAAGCCTATTGTTGCAGCCTTTAAGTGA 1974 0.4068 MSYFLCLPLGTKANETYDGSRQGQNSLVGVKCSVQISREESVMIGVPEQGICLTWEDLCVSVSSGKGGSKGILEGLTGYAKPGQLLAIMGPSGCGKTTLLDALAGRLSSNAKQTGNILINGHKQALAYGTSAYLTQDEAILTTLTIGEAVYYSAQLQLPDSMSKSEKTERANFTIKEMGLQDAIHARIGGGGSKGISGGQKRRVSICIEILTRPSLLFLDEPTSGLDSAASYYVMSRIARLNKKDGIPRTIVASIHQPSNEVFQLFHNLCLLSSGKVVYFGPAPAASKLFASNGFPCPSLQNPSDHFVKTINKDFEQENLEQGLATGLTKEAAIHMLVKSYKSSEISYQVQTEIVEIRKRDSSAMEKKSHAAFFTQCLVLTRRSFVNMYRDVGYYWLRLFIYGGLAISLGTIFHDIGSSKESAQARGSLLMFVATFLTFITIGGFPSFAEEMKVFERERLNGHYGITAYIIGQTLSSIPYLLLISLIPGALVYYLTALHPGCQHFLYFISVLFVSVMLVESLMMIVASVVPNFLMGIITGAGILGVMMLDGGFYRLPSDLPKPFWRYPLYYISIHKYAFQGLFKNEFEGLTLTQNQVGEAMNISGEEMLKTLWQVEMGHSKWVDLSILLGMIILYRILFLVIIKGIEKVKPIVAAFK* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00286 657 SMART AAA_5 82 271 IPR003593 GO:0016887
Rops11g00286 657 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 46 654 - -
Rops11g00286 657 ProSitePatterns ABC transporters family signature. 196 210 IPR017871 GO:0005524|GO:0016887
Rops11g00286 657 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 53 299 IPR003439 GO:0005524
Rops11g00286 657 Pfam ABC-2 type transporter 256 367 IPR043926 GO:0140359
Rops11g00286 657 Pfam ABC-2 type transporter 375 587 IPR013525 GO:0016020|GO:0140359
Rops11g00286 657 Pfam ABC transporter 75 224 IPR003439 GO:0005524
Rops11g00286 657 FunFam ABC transporter G family member 11 51 340 - -
Rops11g00286 657 Gene3D - 51 377 IPR027417 -
Rops11g00286 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 285 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00286 Rops-Chr11 3872277 3876149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00286 72 281 Calmodulin-binding Proteins AT2G36910 26.047 6.77e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00286 K05681 - gmx:100789571 934.095