Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00272 ATGGATTGTCTCTGTTGCTTCAACTCTGTCTCTCAGGGACGTTCTTCACGTAGCTCTGGCAAAGGCAAGAGCCATCAGTGCCCAGTTAAGTATGGCTTTAGCCTAGTTAAAGGGAAAGCAAACCACCCGATGGAGGACTATCATGTAGCAAAAATTGTTCAGTTCAAAGGGCAAGAGTTAGGACTTTTTGCTATCTATGATGGACACTTGGGAGACAGTGTGCCGGCCTATTTACAAAGGCATCTCTTTTCTAATATATTGAAGGAAGAGGACTTCTGGACTGATCCAAACAGTTCCATCATCAAGGCATATGAGACAACAGATCAGGCCATTCTTTCTCACAGTCCTGATTTGGGGCGAGGAGGATCAACTGCAGTGACTGCCATTCTTATGAATAATCAGAAGTTATGGATAGCAAATGTTGGAGATTCACGAGCAGTTCTGTCAAGGAGAGGGGTGGCCATACAGATGACAGTTGATCATGAGCCCAATACTGAAAGGGGCATCATTGAGAACAAAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTAGCAGTTTCTCGGGCATTCGGAGACAAAAACCTAAAGTCACACTTGCGATCTGATCCTGATGTCATGCAGGATGATATTGACCCAGAAACTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCAAACCAAGAGGCAGTTGATATTGCAAGAAAGATTAAAGACCCTCAAAAGGCAGCTAAACAACTAGCTGCAGAGGCATTGAACAGAGAGAGTAAAGATGATATTTCATGCATTGTAGTTCGCTTCAAGGGATGA 840 0.4417 MDCLCCFNSVSQGRSSRSSGKGKSHQCPVKYGFSLVKGKANHPMEDYHVAKIVQFKGQELGLFAIYDGHLGDSVPAYLQRHLFSNILKEEDFWTDPNSSIIKAYETTDQAILSHSPDLGRGGSTAVTAILMNNQKLWIANVGDSRAVLSRRGVAIQMTVDHEPNTERGIIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDVMQDDIDPETELLILASDGLWKVMANQEAVDIARKIKDPQKAAKQLAAEALNRESKDDISCIVVRFKG* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00272 279 Gene3D - 9 279 IPR036457 -
Rops11g00272 279 SMART PP2C_SIG_2 41 277 IPR001932 -
Rops11g00272 279 ProSiteProfiles PPM-type phosphatase domain profile. 30 277 IPR001932 -
Rops11g00272 279 CDD PP2Cc 29 277 IPR001932 -
Rops11g00272 279 SMART PP2C_4 26 275 IPR001932 -
Rops11g00272 279 Pfam Protein phosphatase 2C 39 270 IPR001932 -
Rops11g00272 279 FunFam Probable protein phosphatase 2C 39 21 278 - -
Rops11g00272 279 SUPERFAMILY PP2C-like 25 278 IPR036457 -
Rops11g00272 279 PANTHER PROTEIN PHOSPHATASE 21 277 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00272 Rops-Chr11 3727973 3732360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00272 1 278 PP2C-type Phosphatase Gene Family AT1G22280 69.338 8.43e-143 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00272 K17506 - gmx:100787659 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01771 2 27320022 27328838 Rops11g00272 11 3727973 3732360 PCT