Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00269 ATGGAGAATAGAAACTTAATTTTTAAGCTTTTTTCACTGAGAGAGGAAGAGGAATATTCAAGTAAGGAAGAGCCAACTCTAGAGATTGATATATCACAACACAAGGTGAGAGAACATCTGTTTCACAGGCAGGTTAAAGAGAAACTGTACTCGTGGCTTCTTCACAAAGTAACTGAGAGTGGTCAAGGACCAAATGTATTAGATAAGGATGGGCAGGGTGTGCTACATTTGGTAGCTGTTCTTGGTTATGATTGGGCCATAACCCCAATTTTAACTGCTGGGGTTAATATCAACTTCCGCGATGTAAATGGATGGACAGCTTTACATTGGGCTGCATCCTGTGGCAGTTGCTTTGCTGCCCTTGTCTCCATGGGTGCAGTGTCTGGAGCATTGACAGATCCATCTCCAGCATTTCCTTCAGGCAGAACACCTGCGGATCTTGCCTCCAGCAATGGGCACAAAGGAATCTCTGGTTTTCTTGCGGAGTCTTTATTAACTAGTCACCTTAAATCCCTCACAATGGATGATCAACATAAAGGTGGTCAGCAAGAAATTTCGGGGATAAAAGTGGAGAAGACAGTTTCAGAACGAACTGCAGCACCTGTGCTCTTTCGTGATATGCCAGATGCCCTCTGCCTTCAGGATTCCCTTTCTGCTGTCCATAATGCTACACAAGTTGCTGATAATCAGCGAGCTCTTTCCCTTTTAGATTCTAAGGCAGTCAAATCTGGACAAGGAGATGGTTTAGCCCATTCTGCTGCTATACAAATACAGAAAAAATTTCGTGGTTGGAAGATGAGAAAAGAGTTCTTGATCATTCGGGAAAGAATTGTTAAAATGCAGGCATGTAATATGAGTTCAGATGATGATATGCTTTCAGATGATGGTGTATGCTTTCATATGATGAAATCTGGCATTGATGCTGCTGGAATTGCGCGTGACACTGACTTGTTTGGTTCAAACCGATTTATAACCAAAATGGAAGTTGTGAAGATCAACATAAACTTTTATATTGAGGCGAATATTTCAAACACACCTATAGTGCATTATGAAGGAGGGGAATGTCACACATATGAGGACTTTGACTCAAACCTTATATATGTACCCCATTTTGTGCAATACGTGAAGAGTAAGGGGTACAAGAATGATTTTATATTGTGGCATAAATTTGAAGATGAAGGGATGAAGGAAATTAAATTGTTTGATAGTGATGCACATGTGTTAAAAGTGATTGAGAGGTTTAAAAAAAAGGAGGTAACTTTGTTGCAACTATATGTTAACCATGTAGTGGAGACAAATGCAAAGGTGCATAAGCCAACAATTTATTCACATCCAACACTCGAAGAACATGATGTTTATGAGAGATATTTACATAAGGAGGTAGAAGGCCAAGAGGACAAAGATGAAGATGAACAAAAAAAGGTAGAGGAATAG 1434 0.3996 MENRNLIFKLFSLREEEEYSSKEEPTLEIDISQHKVREHLFHRQVKEKLYSWLLHKVTESGQGPNVLDKDGQGVLHLVAVLGYDWAITPILTAGVNINFRDVNGWTALHWAASCGSCFAALVSMGAVSGALTDPSPAFPSGRTPADLASSNGHKGISGFLAESLLTSHLKSLTMDDQHKGGQQEISGIKVEKTVSERTAAPVLFRDMPDALCLQDSLSAVHNATQVADNQRALSLLDSKAVKSGQGDGLAHSAAIQIQKKFRGWKMRKEFLIIRERIVKMQACNMSSDDDMLSDDGVCFHMMKSGIDAAGIARDTDLFGSNRFITKMEVVKININFYIEANISNTPIVHYEGGECHTYEDFDSNLIYVPHFVQYVKSKGYKNDFILWHKFEDEGMKEIKLFDSDAHVLKVIERFKKKEVTLLQLYVNHVVETNAKVHKPTIYSHPTLEEHDVYERYLHKEVEGQEDKDEDEQKKVEE* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00269 477 ProSiteProfiles IQ motif profile. 250 279 IPR000048 GO:0005515
Rops11g00269 477 Pfam Ankyrin repeats (3 copies) 75 162 IPR002110 GO:0005515
Rops11g00269 477 Gene3D - 39 175 IPR036770 -
Rops11g00269 477 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 229 283 - -
Rops11g00269 477 SUPERFAMILY Ankyrin repeat 58 162 IPR036770 -
Rops11g00269 477 Gene3D - 250 284 - -
Rops11g00269 477 Coils Coil 461 477 - -
Rops11g00269 477 Pfam IQ calmodulin-binding motif 251 270 IPR000048 GO:0005515
Rops11g00269 477 SMART iq_5 249 271 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00269 Rops-Chr11 3632781 3638976 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00269 2 282 CAMTA Transcription Factor Family AT5G09410 52.090 3.63e-95 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00269 K21596 - gmx:100818124 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01768 2 27290102 27300872 Rops11g00269 11 3632781 3638976 PCT