Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00268 ATGGCGGAGCACGCTTCTTCTTATGGATTGCGTCCTCGATTAGGTAATCATGGGCAACCATCAATTTCTGGAACGTGTTATATCCCAGTTTTTGATGGGGATAAATTTAGAGGAAATGATACTACTTGTATTGATGGCCCGAAAGCACATGACATGGCATCATGGCACACTAGCTTGCAATGCACTGCCGATTTGCATACTAATCCTTCTCTTGTACCATTTCCTTCCATCCCATCTGGTTCAGTGGGACACATCCTTGAACAAAAACAGAGCATTTTGGGAGACCTTTCAATGAGCAAAAGTGGCCTCAATGATGAAGCACGGAACTCTCAGTCTTTCCAATCAAATTGGCAGATTCCTTTTGAAGACACTGCTGGACACATGCATAACTTAACCCAATCATCAAGTTTGGAATTTGAATCTGATTATGGCACTGGTTTACTGGGGAATGAAGCTCATAAAGAAAGTTCAGAAGTTTCTCCTGTCATGTGTTGTACTCATGGTGAGGGAAAAGAGCAGGTTGTGCAGCAAAACTATCCAGAACGGCATGTAGATGGACAACCTCAACATGCACTAAAGTCCAATTCTGTAAATAAAGTTCCTGATATTCAGCAATTACAATTTGAAGCCCAGCAGCGGTGGTTGCTACCTGAAGAAATTTGTGATATTCTTCGTAATTATCAGATGCTTCATATCTCATCAGAACCTCCTAACAGGCCTCTGAGTGGTTCACTTTTTCTATTTGATCGGAATGTTTTGAAATATTTTAGAAAGGATGGGCATAATTGGAGAAAGAAAAAAAATGGAAAAACTGTGAAAGAAGCTCATGAAAAGTTGAAGGTAAGCTTGGAATTTGCACAAGTTTGGTGGTTAATCAAGTCTTTGTTGGATGTGTTGATCTGTTACACTGCTACTATGCCCATGGAGAAGAAAATGAAAATTTTCAAAGGCATGCTTGAACAGGATATGGTGCACATAGTATTTGTCCATTACTTGGAAGTTAAGGGTAACAAGTCAAACATTGGAGGAAATACTGATAGTGACAAGGTCGTCAACTCTCCTTCATCAGGCTTTCCCACAAATCATAGCAGTGTGCCTTCATTGAGAGCAGATTCCATGAGCCAAACTTGCAGTTTGACATCTTTACGTGAAGTTGCTGATTCTGGTGATTACGGGCAGCCATCAGTTTCTGGAACAGATTATATCCCACTTGTTGACGGGGATAAATTTAGAGGAAATGATACTACTTGTATTGATGGCTCGAAAGCACATGACATGGCATCATGGGACAATGTCATGCAATGCACTGCCGAGTTTCATACTGATCCCTCTCTTGTATCATTTCCTTCCATCCCATCTGGTTCAATGGGAAACATCCTTGAACAAAAACAGAACATTTTGGGTGACCTTTTATTGAGCAAAAGTGGCCTCACCGATGAAGCAGGGAACTCTCAGTCTCTCCAATCAAATTGGCAGATTCCTTTTGAAGACACTGCTGGACACATGCTGAACTTAATCCAATCATCGAGTTTTGAATTTGAATCAGATTATGGCACTGATTTCCTGTGGAATGAAGCTTATAAGGAAAGTTCAGAAGTTTCTCCTGTCCTGTTTAGTTCTCATGGTGCACCAAAAGAGCAGCTTGTGCAGAAAAATTATCTAGAACAGCATGTAGATGGAACACGTGCTAAAGTCCAATTCTGCAAATAA 1710 0.407 MAEHASSYGLRPRLGNHGQPSISGTCYIPVFDGDKFRGNDTTCIDGPKAHDMASWHTSLQCTADLHTNPSLVPFPSIPSGSVGHILEQKQSILGDLSMSKSGLNDEARNSQSFQSNWQIPFEDTAGHMHNLTQSSSLEFESDYGTGLLGNEAHKESSEVSPVMCCTHGEGKEQVVQQNYPERHVDGQPQHALKSNSVNKVPDIQQLQFEAQQRWLLPEEICDILRNYQMLHISSEPPNRPLSGSLFLFDRNVLKYFRKDGHNWRKKKNGKTVKEAHEKLKVSLEFAQVWWLIKSLLDVLICYTATMPMEKKMKIFKGMLEQDMVHIVFVHYLEVKGNKSNIGGNTDSDKVVNSPSSGFPTNHSSVPSLRADSMSQTCSLTSLREVADSGDYGQPSVSGTDYIPLVDGDKFRGNDTTCIDGSKAHDMASWDNVMQCTAEFHTDPSLVSFPSIPSGSMGNILEQKQNILGDLLLSKSGLTDEAGNSQSLQSNWQIPFEDTAGHMLNLIQSSSFEFESDYGTDFLWNEAYKESSEVSPVLFSSHGAPKEQLVQKNYLEQHVDGTRAKVQFCK* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00268 569 SMART CG_1_2 206 335 IPR005559 GO:0003677
Rops11g00268 569 MobiDBLite consensus disorder prediction 342 365 - -
Rops11g00268 569 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 202 469 - -
Rops11g00268 569 Pfam CG-1 domain 209 333 IPR005559 GO:0003677
Rops11g00268 569 ProSiteProfiles CG-1 DNA-binding domain profile. 203 340 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00268 Rops-Chr11 3621635 3631831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00268 202 498 CAMTA Transcription Factor Family AT5G64220 40.060 4.61e-51 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00268 K21596 - gmx:100795682 349.362