Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00267 ATGGATTCTTCATTGTCTGTGACTGTAACGCAGTTACAGATACAGAAGGCGCTTTTCAAACCTCTAAACAACCATTTGGGCAGAGACAGAGGTAGACCACTTAGTTACCGTCTCAACTATTGCGCCTCTATTACGCCTTTGCGGTGCTCAGCTGGTGGTGGTGGTGGTGGTGGTGGTGCTGTTGGTGAAGACGATGATGATGCTATTGTTCTCAATGTTGGGGGAATGATGTGTGAGGGATGTGCATCTAGCGTCAAAAAAATTCTAGAAAGTCGACCACAAGTGTCATCTGCCAGTGTAAATCTAACATCGGAGATAGCAATAGTTTCCACTGTACCTGAAGAAAAAACTGCACCAAATTGGCAAAAGCAATTAGGGGAGGCACTTGCACAGCATTTAACTAGCTGTGGTTTCAGTTCTACCCTTCGAGTGGCAGGTCAGGAAGTTAGCGACTAG 456 0.4583 MDSSLSVTVTQLQIQKALFKPLNNHLGRDRGRPLSYRLNYCASITPLRCSAGGGGGGGGAVGEDDDDAIVLNVGGMMCEGCASSVKKILESRPQVSSASVNLTSEIAIVSTVPEEKTAPNWQKQLGEALAQHLTSCGFSSTLRVAGQEVSD* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00267 151 SUPERFAMILY HMA, heavy metal-associated domain 68 121 IPR036163 GO:0046872
Rops11g00267 151 FunFam Copper-transporting ATPase PAA1, chloroplastic 67 142 - -
Rops11g00267 151 ProSiteProfiles Heavy-metal-associated domain profile. 67 134 IPR006121 GO:0046872
Rops11g00267 151 Pfam Heavy-metal-associated domain 70 138 IPR006121 GO:0046872
Rops11g00267 151 ProSitePatterns Heavy-metal-associated domain. 73 102 IPR017969 GO:0046872
Rops11g00267 151 CDD HMA 70 141 IPR006121 GO:0046872
Rops11g00267 151 Gene3D - 67 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00267 Rops-Chr11 3603394 3604794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00267 54 145 Primary Pumps ATPases AT4G33520 61.957 3.05e-34 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00267 K17686 - ccaj:109805170 149.058