Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00259 ATGGGGTTTCCCCTTTTAGTTCAACATATTACTTTTTCAGTTCTTGCTGTTCTGAACTCACTTGCTATAGCTCAAGAAGTTCCTATAAGAGAGAAAGATGCCCTTTTGGGCCTCAGAGCCACTTTCAACCACCCTTTTCTAAATGATAATTGGACTGGCCTCCACTGCAATGCAAATGATCCATCAAGGTGGTTTGGGATTCAATGTGCCAATGGTCATGTCACAGGTATGGTTTTGGAAGGTATGGAACTGGAAGGAGAAGTCAATGTAAATGCTTTCTTTGACCTTGAAGAGTTGTTAATGCTGAGCTTCAAGAACAATTCTTTAAGGGGAAATGTGATGAACTTCTCCAACAATCACCAAATGAAGTACATTGATTTGTCAGGCAATGTTTTAGAAGGGTCAATATCAAAATCCCTTGTAGGTCTTAACCTCTTGGAAACATTGTTTCTACAAGATAATAGGCTCACAGGTTCAATACCAGAGTTTAGTCAATCAAGTTTGGAGATATTTAATGTCTCAGATAACAACCTTGAGGGGTCAATCCCAACAACTCCTACTCTCCAATCAATTGACCCTGCTTCATACTCTGGAAATCCTAGATTATGTGGTCCACCTTCTCCTAATTCCTGCACCAACTCTTCTATCCTATTACCCTTAAATGGCACAGACAACAGTGAAGTCCCAAATAAACCTTCAGATAAAAATAAAAATTCCAATATTTCGTTAATTTTCAATGTGGTTCTTCTGCTTGCAATTTTATTGCTATTGATTCTTTACTACCATACATCAAGAAAGCTCAATAGAATAGTGAAGGGGCAGATTCCCATGGTGGAAGAAAAAGAGAAAGATGTGGAGATGAGTATGGAAAAGAAGATAGAGATAGGGGAGGGGACAATGATGACAATGGAAGAGAGAAAGGAACTGATATTCTTTAATGAAAAGCCAAAATTTCAAATGGGAGAACTTCTTAGAGCTTCTGCTGAGGCTTTGGGTCATGGAATCATGGGGAATAGTTATAAGGCTATGCTGAATGATGGACCTACCATTGTGGTAAAGAGGCTAAGGGACTTGAAACCACTCACTAAGGAGGAATTTACAAGCATAGTGCAACTCATTGCTGATCTCAAGCACCCAAATTTGTTGCCATTGCTTGCTTACTACCATTCCAGAGATGAGAAGCTGATGCTCTATAGATATGCAGAGAATGGAAATCTTTTCTCCCGACTTCATGATGGCAGAGGTGGAAACCGGGTTCCATTCAGTTGGAACTCAAGATTATCAGTTGCAAGAGGCGTGGCTAGAGCGTTGGAGTACCTGCACCTCAACAACAAGTTCCATAACATTGTCCCTCATGGCAACTTGAGGTCTTCAAACGTACTCTTTGATGAAAAGGATGCAGTTCTTGTTTCTGACTTCAGCCTTACCTCCTTAATAGCACAACCAATTGCAGCTCAGCATATGGTTGTTTACAAATCACCTGAATATGGGTATGCAAGAAAAGTTACAATACAATCAGATGTTTGGAGCTATGGTTCCCTTCTCATAGAACTTCTAACTGGCAAAGTATCTATTTGCTCAGCTCCACAAGGGACCAATGGTGTGGATCTTTGTAGCTGGGTTCATAGAGCTGTGAGAGAAGAATGGACTGCTGAGATCTTTGACAAAGAAATTTCTGGTCAAAAGAGTGTTCTTCCTGGGATGTTAAGGTTGCTGCAGATAGCAATGCGTTGCATTGAGAGGTTCCCAGAGAAACGTCCTGAGATGAGAGAGGTGGTGAGAGAAGTGGAGAAAATACAAGCACCCTTGATCTCTGAAGATGAGGAAGATGTATCTCTAACAGATGATTCCTTTTCAACCAGTACTTCAGGGATTATTGGAGATTAA 1887 0.4059 MGFPLLVQHITFSVLAVLNSLAIAQEVPIREKDALLGLRATFNHPFLNDNWTGLHCNANDPSRWFGIQCANGHVTGMVLEGMELEGEVNVNAFFDLEELLMLSFKNNSLRGNVMNFSNNHQMKYIDLSGNVLEGSISKSLVGLNLLETLFLQDNRLTGSIPEFSQSSLEIFNVSDNNLEGSIPTTPTLQSIDPASYSGNPRLCGPPSPNSCTNSSILLPLNGTDNSEVPNKPSDKNKNSNISLIFNVVLLLAILLLLILYYHTSRKLNRIVKGQIPMVEEKEKDVEMSMEKKIEIGEGTMMTMEERKELIFFNEKPKFQMGELLRASAEALGHGIMGNSYKAMLNDGPTIVVKRLRDLKPLTKEEFTSIVQLIADLKHPNLLPLLAYYHSRDEKLMLYRYAENGNLFSRLHDGRGGNRVPFSWNSRLSVARGVARALEYLHLNNKFHNIVPHGNLRSSNVLFDEKDAVLVSDFSLTSLIAQPIAAQHMVVYKSPEYGYARKVTIQSDVWSYGSLLIELLTGKVSICSAPQGTNGVDLCSWVHRAVREEWTAEIFDKEISGQKSVLPGMLRLLQIAMRCIERFPEKRPEMREVVREVEKIQAPLISEDEEDVSLTDDSFSTSTSGIIGD* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00259 628 SUPERFAMILY Protein kinase-like (PK-like) 329 601 IPR011009 -
Rops11g00259 628 Gene3D Ribonuclease Inhibitor 29 213 IPR032675 -
Rops11g00259 628 SMART serkin_6 325 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00259 628 MobiDBLite consensus disorder prediction 182 208 - -
Rops11g00259 628 SUPERFAMILY L domain-like 73 206 - -
Rops11g00259 628 Gene3D Transferase(Phosphotransferase) domain 1 401 620 - -
Rops11g00259 628 Pfam Protein tyrosine and serine/threonine kinase 329 595 IPR001245 GO:0004672|GO:0006468
Rops11g00259 628 ProSiteProfiles Protein kinase domain profile. 325 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00259 628 MobiDBLite consensus disorder prediction 216 235 - -
Rops11g00259 628 MobiDBLite consensus disorder prediction 608 628 - -
Rops11g00259 628 Gene3D Phosphorylase Kinase; domain 1 294 400 - -
Rops11g00259 628 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 600 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00259 Rops-Chr11 3535209 3537941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00259 31 616 Receptor kinase-like Gene Family AT5G58300 35.656 3.46e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops11g00259 PK_Tyr_Ser-Thr 3.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00259 - - pcin:129284917 739.954