Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00258 ATGTATATTCCTCACAAAAGCTTTAGCTTCCTTCTAGTTATTGTTTTGCTTGCTGTGGCTGTGGTAAACACAGCGGATGGGCATAACATGCGTGTAGGGTTCTATTCGAGGTCATGTCCTCGTGTTGAGTCCATTGTTAGGTCCACAGTTGAATCCCACGTTAGGTCTAACCCTACTTTTGCTGCTGGGTTGCTTAGGATGCACTTCCATGATTGTTTTGTGAGAGGTTGTGATGCTTCTGTTCTCATTGATGGTGCTGGTACTGAGAGAAAAGCTGGACCAAACCTTAATTTAAAAGGATTTGAGGTTATTGATGATGCAAAGACAAAACTAGAGGCTGAATGCCCTGGTGTTGTTTCTTGTGCTGATATCCTTGCCCTTGCAGCTCGTGATTCCGTTGTTCTGAGTGGTGGACTAAGTTGGCAATTGCCCACTGGACGTAGAGATGGACGAGTTTCGATTGGAAGTGAAAGTCTTGTTTTGCCTGGTCCTAATGATTCTGTTGCAATTCAGAAGAAGAAGTTTTCTGATCACGGTCTTAATGTTCAAGACCTCGTCCTTCTCGCTGGTGGACATACAATTGGAACTGCAGCATGCCGATCCTTCGCAGACAGAATATACAACTCAAAGGGCACTGATCCTTCTATTGACCCTTCATTTCTTCCAACTCTACGACAAATTTGCCCACAAAACCAACCAACGAAGAGAGTTGCTTTAGACACTGGAAGCCAATTCAAATTTGATACATCTTATTTTGCTCACCTTAAGAGAGGTCGTGGAGTTCTTCGTTCTGATCAGGTGCTTTGGACTGATCCTTCTACAAGGAGCATTGTTCAGAGGTTCTTAGCCACGGGTCCCTTCAACGTTGAATTTGGCAGGTCTATGGTGAAGATGGGTAACATTGGTGTGAAGACCGGTGCTAATGGTGAAATTCGAAAGAAATGTTCTGCTGTCAATTAA 960 0.4385 MYIPHKSFSFLLVIVLLAVAVVNTADGHNMRVGFYSRSCPRVESIVRSTVESHVRSNPTFAAGLLRMHFHDCFVRGCDASVLIDGAGTERKAGPNLNLKGFEVIDDAKTKLEAECPGVVSCADILALAARDSVVLSGGLSWQLPTGRRDGRVSIGSESLVLPGPNDSVAIQKKKFSDHGLNVQDLVLLAGGHTIGTAACRSFADRIYNSKGTDPSIDPSFLPTLRQICPQNQPTKRVALDTGSQFKFDTSYFAHLKRGRGVLRSDQVLWTDPSTRSIVQRFLATGPFNVEFGRSMVKMGNIGVKTGANGEIRKKCSAVN* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00258 319 ProSiteProfiles Plant heme peroxidase family profile. 29 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 Gene3D Peroxidase, domain 2 162 298 - -
Rops11g00258 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Rops11g00258 319 Gene3D - 33 319 - -
Rops11g00258 319 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Rops11g00258 319 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 FunFam Peroxidase 33 168 - -
Rops11g00258 319 FunFam Peroxidase 162 298 - -
Rops11g00258 319 CDD secretory_peroxidase 31 318 IPR033905 GO:0004601|GO:0042744
Rops11g00258 319 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 PANTHER PEROXIDASE 25-RELATED 15 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 SUPERFAMILY Heme-dependent peroxidases 30 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops11g00258 319 Pfam Peroxidase 46 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00258 Rops-Chr11 3506199 3510134 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00258 7 319 Peroxidase AT5G64120 62.145 1.65e-140 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00258 K00430 - gmx:100789249 505.368