Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00257 ATGAAGGGTGGTTTGTTCTTTCTTTTGCTTGCTTTGGCCATTGTCAACACCGTGCATGGCCAAGGTTCTCGTGTAGGGTTCTATTCGAGGACATGTCCTCGTGCTGAATCCATTGTTAGATCCACAGTTGAATCCCACGTGAAGTCTGACAATTCTTTGGCTGCTGGGATACTCAGGATGCACTTCCACGACTGTTTCGTGCAAGGTTGTGACGCTTCTGTTCTCATAGCTGGTGCTGGCACTGAGAGAACAGCATTTCCAAACCTTGGTTTAAAAGGCTATGAGGTTATTGATGATGCAAAGACAAAGCTCGAGGCTGCATGCCCAGGTGTTGTGTCTTGTGCTGATATCCTTGCCCTCGCTGCTCGTGATTCCGTTGTTCTGAGTGGTGGACTGAGTTGGCAAGTGCCTACTGGACGCAGAGATGGCCGCGTGTCCCTGTCTTCTGATGTGAATAACTTGCCTGGCCCTGGTGATTCTGTTGATGTGCAGAAACAGAAGTTCGCAGCAAAGGGCCTCAACACTCAAGACCTTGTCACCCTCGTTGGTGGACACACTATTGGTACTACAGCATGCCAGTTCTTCAGTAACAGATTGTACAACTTCACTGCCAATGGTCCTGACCCTACCATCAACCCTTCATTTGTTGCACAACTACAAGCACTCTGCCCACAAAACAGTGGAGGTTCAAACCGAGTTGCGCTTGATACTGGTAGTCAAAACACATTTGACACATCTTACTTTTCTAATTTGAGGAACGGCCGTGGGATTCTGCAGTCTGATCAAGCGCTTTGGAATGATGCTTCCACAAAGACCTTTGTGCAGAGGTACTTGGGCTTGAGAGGCTTGCTTGGATTAAAATTCAACGTGGAATTTGGAAGGTCTATGGTGAAGATGAGCAACATTGAGTTGAAGACTGGTACTGATGGTGAAATTCGAAAGATATGTTCTGCTATCAACTAG 963 0.4714 MKGGLFFLLLALAIVNTVHGQGSRVGFYSRTCPRAESIVRSTVESHVKSDNSLAAGILRMHFHDCFVQGCDASVLIAGAGTERTAFPNLGLKGYEVIDDAKTKLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSLSSDVNNLPGPGDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTTACQFFSNRLYNFTANGPDPTINPSFVAQLQALCPQNSGGSNRVALDTGSQNTFDTSYFSNLRNGRGILQSDQALWNDASTKTFVQRYLGLRGLLGLKFNVEFGRSMVKMSNIELKTGTDGEIRKICSAIN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00257 320 FunFam Peroxidase 26 167 - -
Rops11g00257 320 FunFam Peroxidase 155 299 - -
Rops11g00257 320 Pfam Peroxidase 39 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Rops11g00257 320 SUPERFAMILY Heme-dependent peroxidases 24 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 Gene3D - 26 320 - -
Rops11g00257 320 CDD secretory_peroxidase 24 319 IPR033905 GO:0004601|GO:0042744
Rops11g00257 320 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 Gene3D Peroxidase, domain 2 155 299 - -
Rops11g00257 320 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Rops11g00257 320 ProSiteProfiles Plant heme peroxidase family profile. 22 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00257 320 PANTHER PEROXIDASE 25-RELATED 11 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00257 Rops-Chr11 3485762 3487483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00257 14 320 Peroxidase AT5G64120 64.873 3.04e-150 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00257 K00430 - gmx:100783523 530.791