Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00255 ATGGCAGCTGCAACATCTGGTGCTGTGTTAAATGGGCTTGGATCTTCCTTCTTGTGTGGAGGAAAGAGTAGCAAAACCTTGCTTGCTACTGCTATTGGAGGCAAAGTTGGTGCTGCTGTTAGTCCTAGAAGATTTATTGTAGCTGCTGCTGCTGCACCAAAGAAGTCATGGATCCCTGGTGTTAGAGGTGGTGGGAATTTAATCGACCCAGAATGGCTTGATGGATCGCTACCTGGTGACTATGGTTTTGACCCACTTGGCCTAGGCAAGGACCCTGCATTCCTCAAATGGTACAGAGAAGCTGAGCTCATTCATGGGAGGTGGGCAATGGCCGCAGTTGTAGGCATCTTTGTTGGCCAGGCCTGGAGTGGAGTTCCATGGTTTGAGGCTGGAGCTGACCCCAATGCAATTGCTCCTTTCTCCTTTGGTTCTCTTTTGGGCACCCAGTTGCTTCTCATGGGTTGGGTAGAGAGTAAGAGATGGGTGGACTTCTTCAACCCAGATTCACAATCAGTGGAATGGGCTACTCCATGGTCAAGAACTGCTGAGAACTTTGCCAATGCTACTGGTGATCAAGGCTACCCAGGTGGCAAATTCTTTGACCCATTGGGCTTGGCTGGTACTCTTAACGATGGGGTTTACCTTCCAGATAGAGAGAAGCTAGAAAGATTGAAATTGGCTGAGATTAAGCATGCCAGGATTGCTATGTTGGCTATGCTAATTTTCTACTTTGAGGCTGGACAAGGGAAGACCCCCCTTGGTGCTCTTGGCTTGTAA 777 0.4878 MAAATSGAVLNGLGSSFLCGGKSSKTLLATAIGGKVGAAVSPRRFIVAAAAAPKKSWIPGVRGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANATGDQGYPGGKFFDPLGLAGTLNDGVYLPDREKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00255 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 69 256 IPR001344 GO:0009765|GO:0016020
Rops11g00255 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Rops11g00255 258 FunFam Chlorophyll a-b binding protein, chloroplastic 70 257 - -
Rops11g00255 258 SUPERFAMILY Chlorophyll a-b binding protein 68 258 - -
Rops11g00255 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00255 Rops-Chr11 3470476 3471539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00255 1 258 Chloroplast and Mitochondria Gene Families AT1G15820 82.171 2.81e-153 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00255 K08917 - gmx:100500118 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00255 11 3470476 3471539 Rops11g00255 11 3470476 3471539 ECH
Rops2g01743 2 26768097 26769510 Rops11g00255 11 3470476 3471539 PCT