Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00251 ATGGGTGGAGCTGCCATTACCATTGCACTGCAACAGCTCAAAGGTCTGCTTGGCATAAAAGACTTCACTAAGAAAACTGATATTATTTCTGTCATGCGCTCGGTCTGGGGTTCAGTGCACCATGGGTGGAATTGGCAGACAATAGTCATTGGAGTAGCCTTCTTGGCCTTCCTTCTTGCAGCAAAGCATATTGCTAAAAAGAATAAGAAACTCTTTTGGGTGGCTGCAATTGCTCCTATGATCTCTGTTATAGTGTCTACCTTTTTTGTGTACATCACCAGGGCTGACAAGAAAGGCGTATCAATTGTGAAACATATTAAAAAGGGTGTGAATCCAGCATCTGCTAGTGAAATTTATTTCAGTGGAAAATATCTTGGCGCTGGTGTTAGGATTGGTGTGGTATCTGGTATGGTAGCACTCACGGAAGCTGCAGCAATTGGGAGAACATTTGCTGCCATGAAAGACTACTCTCTAGACGGTAACAAAGAAATGGTGGCATTGGGTTCAATGAACCTTATTGGTTCATTGACATCTTGTTATGTGGCTACAGGATCTTTTTCTCGCTCAGCAGTGAACTATATGGCTGGTTGTAAAACTGCTGTATCAAACATTGTTATGTCCATTGTGTTATTATTAACTCTGTTACTCATCACACCGCTATTTAAGTACACTCCAAATGCAGTGCTTGCTTCAATTATTATAGCTGCTGTGATGAGCCTCATTGACATTAAAGCAGCTATTCTTCTCTGGAAGATTGACAAATTCGATTTCTTAGCTTGCATGGGAGCCTTCTTTGGTGTGATCTTCAAAAGTGTTGAGATTGGCCTTCTAATTGCGGTTGCAATATCTTTTATCAAAATCCTTTTACAAGTGACAAGGCCAAGGACTGCAGTACTTGGAAAACTTCCAGGGACTACTATTTATAGGAACATCCAGCAATACCCCAAAGCAACCCAAATTCCTGGCATGTTGATTATCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGATAGAATTTTGAAATGGCTAACTGATGAAGAGGCACAAAGAACAGCAAGTGAATTTCCCAGCCTACAGTATCTTATTGTTGAAATGTCACCTGTTACTGATATTGACACTAGTGGCATCCATGCTTTTGAAGATTTATTGAAGAGTCTTCAGAAAAGAGGAGTCCAGCTTCTTCTGGCAAACCCGGGGCCAGTTGTAACGGAGAAGCTCCAAGCATCTATGTTATCAGAAGTAATCGGAGAAGATAAAATATTTCTATCAGTTGCTGATGCTGTTGCAACTTTTGGTCCAAAGGGTGATCCTTATAAGTAG 1335 0.409 MGGAAITIALQQLKGLLGIKDFTKKTDIISVMRSVWGSVHHGWNWQTIVIGVAFLAFLLAAKHIAKKNKKLFWVAAIAPMISVIVSTFFVYITRADKKGVSIVKHIKKGVNPASASEIYFSGKYLGAGVRIGVVSGMVALTEAAAIGRTFAAMKDYSLDGNKEMVALGSMNLIGSLTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSIVLLLTLLLITPLFKYTPNAVLASIIIAAVMSLIDIKAAILLWKIDKFDFLACMGAFFGVIFKSVEIGLLIAVAISFIKILLQVTRPRTAVLGKLPGTTIYRNIQQYPKATQIPGMLIIRVDSAIYFSNSNYIKDRILKWLTDEEAQRTASEFPSLQYLIVEMSPVTDIDTSGIHAFEDLLKSLQKRGVQLLLANPGPVVTEKLQASMLSEVIGEDKIFLSVADAVATFGPKGDPYK* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00251 444 Pfam STAS domain 314 432 IPR002645 -
Rops11g00251 444 Pfam Sulfate permease family 1 261 IPR011547 GO:0016020
Rops11g00251 444 Gene3D STAS domain 293 437 IPR036513 -
Rops11g00251 444 CDD STAS_SulP_like_sulfate_transporter 314 429 - -
Rops11g00251 444 PANTHER SULFATE TRANSPORTER 1 434 IPR001902 GO:0016020|GO:0055085
Rops11g00251 444 SUPERFAMILY SpoIIaa-like 315 437 IPR036513 -
Rops11g00251 444 ProSiteProfiles STAS domain profile. 313 436 IPR002645 -
Rops11g00251 444 FunFam Sulfate transporter 31 293 439 - -
Rops11g00251 444 NCBIfam sulfate permease 1 432 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00251 Rops-Chr11 3421261 3424829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00251 1 439 Inorganic Solute Cotransporters AT1G22150 74.487 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00251 K17470 - gmx:100806204 728.013