Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00250 ATGAGTCAGGTTTTCACCGATGAGGTTGTGGCAAGGGCCATGGGGGAAATAAGCAGTGGACCTTCTTCACGTAGACATGGAGATACTTTGCCACATGTTCACAAAGTGGGAGCTCCTCCTAAACAAACACTTTTCCAACAGTTCAAATATTCTTTCATTGAGTTTTTCTTCTCAGATGACCCCTTAAGCAAATTTAAGCACCAAACTGGATCAAGAAAGTTTATTCTAGGCCTGCAATCAGTCTTCCCTATTCTTGAATGGGGAAGAGGTTACAATCTTGCAAAATTCAAGGGTGATTTGATTGCTGGACTTACCATTGCAAGTCTTTGTATTCCTCAGGATATTGCATATGCAAAGCTTGCAAATTTGGAACCCCAATATGGACTATACACTAGCTTTGTGACTCCTCTTGTGTATGCTTTCATGGGAAGTTCAAGAGATATTGCCATAGGACCCGTAGCTGTGGTGTCCCTCTTGCTTGGATCTTTGCTTAGCGCTGAAATTAGTGACTTCACAAGTCATGAATACCTTCGTCTTGCATTTACTGCCACCTTCTTCGCAGGACTCACTCAAATGGCACTCGGAGTTTTCAGGTAA 597 0.4255 MSQVFTDEVVARAMGEISSGPSSRRHGDTLPHVHKVGAPPKQTLFQQFKYSFIEFFFSDDPLSKFKHQTGSRKFILGLQSVFPILEWGRGYNLAKFKGDLIAGLTIASLCIPQDIAYAKLANLEPQYGLYTSFVTPLVYAFMGSSRDIAIGPVAVVSLLLGSLLSAEISDFTSHEYLRLAFTATFFAGLTQMALGVFR* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00250 198 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Rops11g00250 198 PANTHER SULFATE TRANSPORTER 49 198 IPR001902 GO:0016020|GO:0055085
Rops11g00250 198 Pfam Sulfate permease family 96 198 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00250 Rops-Chr11 3421261 3422201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00250 15 198 Inorganic Solute Cotransporters AT1G22150 70.430 6.73e-84 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00250 K17470 - gmx:100784124 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00250 11 3421261 3422201 Rops11g00250 11 3421261 3422201 ECH