Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00228 ATGGCTTCCCTTGATGAAATTTCACCTAACCATGTTGAGATTCCTATCCATGCAAATGGTGTTGAGCCAAAACCAAACCAAGAAGAGGTTGACGAGAGTAACATTAACTACTCTAAGAGGGCACAGTGGCTTAGAGCAGCTGTTTTGGGAGCCAATGATGGGTTGGTTTCTATTGCATCATTGATGATGGGTGTTGGAGCTGTTAAGGAAAACATCAGCACCATGCTTCTAGCTGGCATGGCAGGGTTAATAGCTGGAGCTTGTAGCATGGCAATTGGTGAGTTTGTCTCTGTGTACACTCAGTATGACATAGAGAAGGCTCAAATTGAAAGAGAGAAAGAAGTTAACAACACTGATGGAGTGGATGAAGAAGCTCAAAGGGTGAAGTTACCAAATCCATTTCAAGCTGCTCTAGCATCAGCACTTGCATTTTCTGTAGGTGCCATGGTGCCACTTCTAGCAGCTGCATTTATAAGGGACTATAAGATTAGGATTGCTGTTGTTGCTGTTGTGGCTAGCCTTGCATTGTTGGGATTTGGTGGGGTAGGAGCAGTTCTTGGAAAAACTCCAGTGAGGAAGTCATGTGTTAGAGTGCTGATTGGAGGTTTGATGGCCATGGCCATAACATTTGGCCTCACCAAGTTATTTGGCACTGCTGGACTTTCAATGTGA 672 0.4435 MASLDEISPNHVEIPIHANGVEPKPNQEEVDESNINYSKRAQWLRAAVLGANDGLVSIASLMMGVGAVKENISTMLLAGMAGLIAGACSMAIGEFVSVYTQYDIEKAQIEREKEVNNTDGVDEEAQRVKLPNPFQAALASALAFSVGAMVPLLAAAFIRDYKIRIAVVAVVASLALLGFGGVGAVLGKTPVRKSCVRVLIGGLMAMAITFGLTKLFGTAGLSM* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00228 223 Pfam VIT family 44 128 IPR008217 GO:0005384|GO:0030026
Rops11g00228 223 Pfam VIT family 127 213 IPR008217 GO:0005384|GO:0030026
Rops11g00228 223 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 23 216 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00228 Rops-Chr11 3125970 3126641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00228 26 221 Nodulin-like Gene Family AT3G43660 64.796 2.51e-87 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00228 K22736 - gmx:100817158 317.775