Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00221 ATGGCAGATATTCAACCAAATCACCATGCTGTAATAGCCCCTAGTGAAACCAACGCTTCAAAAGTATTTAACATAGACTTGGAAGATCACAAGGAGCAAGAGGTTGAGGAGGGTGGTTTTGACTATGCCAAGAGGGCACAGTGGCTTAGAGCAGCTGTTTTGGGTGCCAATGATGGCTTGCTCTCAACTGCATCCCTCATGATGGGTGTTGGAGCTATCAGTAAGGATGTTAAGACCATGATCCTAACTGGTATTGCAGGGTTGGTGGCTGGTGCATGCAGCATGGCCATTGGAGAGTTTGTTTCTGTTTATTCACAATATGATATTGAACTGGCTCAGATGAAAAGAGAAGGAAACACTAATAAAGAGAAATTACCAAACCCCTATTCTGCTGCCTTGGCTTCTGCTCTTGCTTTTACTGTTGGTGCAGCGGTGCCACTACTTGGTGCTGCGTTTATCAAAGATTATAAGGTGAGGTTAGGGGTGGTGGTGGCTGTTGTGAGCCTTGCCTTGTTGGTGTTTGGAGGGTTGAGTTCTGTTCTTGGGAAAGCACCTTTGGTGAAATCATCTTTGAGGGTTTTGATTGGGGGATGGCTGGCCATGGCAGTTACTTTTGGTTTAACAAAGTCTGTAGATCATGTAGGAATTTGA 651 0.4501 MADIQPNHHAVIAPSETNASKVFNIDLEDHKEQEVEEGGFDYAKRAQWLRAAVLGANDGLLSTASLMMGVGAISKDVKTMILTGIAGLVAGACSMAIGEFVSVYSQYDIELAQMKREGNTNKEKLPNPYSAALASALAFTVGAAVPLLGAAFIKDYKVRLGVVVAVVSLALLVFGGLSSVLGKAPLVKSSLRVLIGGWLAMAVTFGLTKSVDHVGI* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00221 216 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 28 213 IPR008217 GO:0005384|GO:0030026
Rops11g00221 216 Pfam VIT family 115 208 IPR008217 GO:0005384|GO:0030026
Rops11g00221 216 Pfam VIT family 49 119 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00221 Rops-Chr11 3042836 3043662 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00221 24 216 Nodulin-like Gene Family AT3G43660 71.795 3.90e-98 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00221 K22736 - gmx:121175311 282.337