Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00216 ATGAAGTACACATGCGATGTAGTGCAGGGGTTGAAGCCAGCGCTGCTAATGGTGGTGGTGCAGATAGCATATGCAGGGGTCAATGTGCTCTACAAGCTCACAGTAAACGATGGCATGAACTTGAGGATTGCTATTGCTTACCGTTTTGTATTCGCAACTGCTTTCATAGCTCCTCTTGCTCTCATTCTTGAAAGGAAGAAGAGGACAAAGATGACTTGGACGGTACTGTTTCAGTCATTTCTGAGCGGTTTATTTGGAGGTTTTTTAGCTCAAAACTTCTACTTAGAGTCACTGGCTTTAACTTCTGCGACGTTTGCATCCGCCATGGCTAACCTAACACCAGCCATAACCTTTATCATGGCCGTTTCCTTCGGGTTGGAACAATTAAATTTAGGAACGGCAGCAGGGAAGGTCAAGATTTTTGGTACATTAACTGGAATTGGAGGGGCAATGATACTGACTTTTGTTAAAGGTATGGAAATCGAGATGGGGTCCTTTCACTTAAACCTTTCGCATCATCCAAACGGTGCGCATCCACACGCCATCAACGGTGGTAAGACCGTCTTGGGTGCTCTATGCGCTTTGGCCAGTGACATCTCTTTTGCATTTTGGCTAATTATTCAGGCAAAGATGAGTAAAAGATACCCAAGTCATTACTCAAGCACAGCTTTGATGTCTTTTTGGGCGTCACTGCTATCCATTCTGTTTGCTCTTTGCTTTGAGAGGGACTGGAGTCAGTGGAGGCTGGGTTTGAATGTTAGGCTTTTAACTGTTACTTATTCGGGTATGGTGGTTTCTGGAATAATGGTGGCTGTGATTTCTTGGTGTGTACACCTGAGAGGCCCGTTGTTTGTCTCTGTTTTCGACCCTCTAACGCTTGTGATTGTGGCCTTGGTTAGTTCTACGATGTTGAACGAGAAGCTATACCTCGGAAGCATCATTGGAACAGTGTTGATTGTGTGTGGCTTATACGCGGTTTTATGGGGTAAAAGCAAAGAGATGAAGAAGATGATTCCATTAGTGCCATCACAAAGCCCCCTTGAATCCGATTCAGTCGACATAGTGGTGAGTTCTGCCGTAGAAGATAAAAGCAACCACAATTAA 1104 0.4457 MKYTCDVVQGLKPALLMVVVQIAYAGVNVLYKLTVNDGMNLRIAIAYRFVFATAFIAPLALILERKKRTKMTWTVLFQSFLSGLFGGFLAQNFYLESLALTSATFASAMANLTPAITFIMAVSFGLEQLNLGTAAGKVKIFGTLTGIGGAMILTFVKGMEIEMGSFHLNLSHHPNGAHPHAINGGKTVLGALCALASDISFAFWLIIQAKMSKRYPSHYSSTALMSFWASLLSILFALCFERDWSQWRLGLNVRLLTVTYSGMVVSGIMVAVISWCVHLRGPLFVSVFDPLTLVIVALVSSTMLNEKLYLGSIIGTVLIVCGLYAVLWGKSKEMKKMIPLVPSQSPLESDSVDIVVSSAVEDKSNHN* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00216 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 153 - -
Rops11g00216 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 332 - -
Rops11g00216 367 PANTHER WAT1-RELATED PROTEIN 12 342 IPR030184 GO:0016020|GO:0022857
Rops11g00216 367 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Rops11g00216 367 Pfam EamA-like transporter family 12 142 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00216 Rops-Chr11 2939494 2943875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00216 1 358 Nodulin-like Gene Family AT1G68170 44.972 9.27e-103 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00216 - - gmx:100810649 540.036